RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
SMG7-215ENST00000515829 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
SMG7-215ENST00000515829 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
SMG7-215ENST00000515829 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
SMG7-215ENST00000515829 SPRR2DP22532 72 aa3.34□□□□□ -1.87
SMG7-215ENST00000515829 LCE2AQ5TA79 106 aaPredicted RBP3.29□□□□□ -1.88
SMG7-215ENST00000515829 KRTAP19-3Q7Z4W3 81 aa3.28□□□□□ -1.88
SMG7-215ENST00000515829 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
SMG7-215ENST00000515829 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
SMG7-215ENST00000515829 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
SMG7-215ENST00000515829 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
SMG7-215ENST00000515829 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
SMG7-215ENST00000515829 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
SMG7-215ENST00000515829 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
SMG7-215ENST00000515829 MT1MQ8N339 61 aa3.22□□□□□ -1.89
SMG7-215ENST00000515829 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SMG7-215ENST00000515829 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
SMG7-215ENST00000515829 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
SMG7-215ENST00000515829 LCE2DQ5TA82 110 aaPredicted RBP3.12□□□□□ -1.91
SMG7-215ENST00000515829 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
SMG7-215ENST00000515829 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
SMG7-215ENST00000515829 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
SMG7-215ENST00000515829 MT3P25713 68 aa3.07□□□□□ -1.92
SMG7-215ENST00000515829 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
SMG7-215ENST00000515829 PRM1P04553 51 aa2.99□□□□□ -1.93
SMG7-215ENST00000515829 KRTAP9-2Q9BYQ4 174 aa2.97□□□□□ -1.93
SMG7-215ENST00000515829 MT1AP04731 61 aa2.94□□□□□ -1.94
SMG7-215ENST00000515829 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
SMG7-215ENST00000515829 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
SMG7-215ENST00000515829 MT4P47944 62 aa2.88□□□□□ -1.95
SMG7-215ENST00000515829 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
SMG7-215ENST00000515829 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
SMG7-215ENST00000515829 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
SMG7-215ENST00000515829 KRTAP9-6A0A140TA67 174 aa2.8□□□□□ -1.96
SMG7-215ENST00000515829 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
SMG7-215ENST00000515829 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
SMG7-215ENST00000515829 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SMG7-215ENST00000515829 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
SMG7-215ENST00000515829 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
SMG7-215ENST00000515829 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
SMG7-215ENST00000515829 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
SMG7-215ENST00000515829 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
SMG7-215ENST00000515829 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
SMG7-215ENST00000515829 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
SMG7-215ENST00000515829 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
SMG7-215ENST00000515829 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
SMG7-215ENST00000515829 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
SMG7-215ENST00000515829 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
SMG7-215ENST00000515829 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
SMG7-215ENST00000515829 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
SMG7-215ENST00000515829 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
SMG7-215ENST00000515829 NEBP20929 6669 aa2.26□□□□□ -2.05
SMG7-215ENST00000515829 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
SMG7-215ENST00000515829 KRTAP9-9Q9BYP9 154 aa2.25□□□□□ -2.05
SMG7-215ENST00000515829 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SMG7-215ENST00000515829 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
SMG7-215ENST00000515829 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
SMG7-215ENST00000515829 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
SMG7-215ENST00000515829 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
SMG7-215ENST00000515829 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
SMG7-215ENST00000515829 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
SMG7-215ENST00000515829 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
SMG7-215ENST00000515829 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.11
SMG7-215ENST00000515829 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
SMG7-215ENST00000515829 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
SMG7-215ENST00000515829 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
SMG7-215ENST00000515829 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
SMG7-215ENST00000515829 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
SMG7-215ENST00000515829 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
SMG7-215ENST00000515829 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
SMG7-215ENST00000515829 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
SMG7-215ENST00000515829 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
SMG7-215ENST00000515829 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
SMG7-215ENST00000515829 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SMG7-215ENST00000515829 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
SMG7-215ENST00000515829 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
SMG7-215ENST00000515829 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 89.1 ms