RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 MT1EP04732 61 aa4.36□□□□□ -1.71
SDHA-216ENST00000514027 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
SDHA-216ENST00000514027 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
SDHA-216ENST00000514027 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
SDHA-216ENST00000514027 MT1LQ93083 61 aa4.35□□□□□ -1.71
SDHA-216ENST00000514027 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
SDHA-216ENST00000514027 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
SDHA-216ENST00000514027 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SDHA-216ENST00000514027 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.74
SDHA-216ENST00000514027 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
SDHA-216ENST00000514027 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
SDHA-216ENST00000514027 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
SDHA-216ENST00000514027 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
SDHA-216ENST00000514027 MT1GP13640 62 aa4.1□□□□□ -1.75
SDHA-216ENST00000514027 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
SDHA-216ENST00000514027 MT1MQ8N339 61 aa4.09□□□□□ -1.76
SDHA-216ENST00000514027 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
SDHA-216ENST00000514027 MT3P25713 68 aa4.03□□□□□ -1.76
SDHA-216ENST00000514027 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
SDHA-216ENST00000514027 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
SDHA-216ENST00000514027 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
SDHA-216ENST00000514027 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
SDHA-216ENST00000514027 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
SDHA-216ENST00000514027 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
SDHA-216ENST00000514027 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
SDHA-216ENST00000514027 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
SDHA-216ENST00000514027 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
SDHA-216ENST00000514027 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
SDHA-216ENST00000514027 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
SDHA-216ENST00000514027 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
SDHA-216ENST00000514027 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
SDHA-216ENST00000514027 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
SDHA-216ENST00000514027 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
SDHA-216ENST00000514027 SPRR2EP22531 72 aa3.72□□□□□ -1.81
SDHA-216ENST00000514027 SPRR2BP35325 72 aa3.72□□□□□ -1.81
SDHA-216ENST00000514027 SPRR2AP35326 72 aa3.72□□□□□ -1.81
SDHA-216ENST00000514027 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
SDHA-216ENST00000514027 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
SDHA-216ENST00000514027 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
SDHA-216ENST00000514027 MT1AP04731 61 aa3.64□□□□□ -1.83
SDHA-216ENST00000514027 PRM1P04553 51 aa3.62□□□□□ -1.83
SDHA-216ENST00000514027 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
SDHA-216ENST00000514027 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
SDHA-216ENST00000514027 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
SDHA-216ENST00000514027 SPRR2DP22532 72 aa3.57□□□□□ -1.84
SDHA-216ENST00000514027 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
SDHA-216ENST00000514027 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
SDHA-216ENST00000514027 NEBP20929 6669 aa3.5□□□□□ -1.85
SDHA-216ENST00000514027 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.86
SDHA-216ENST00000514027 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
SDHA-216ENST00000514027 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
SDHA-216ENST00000514027 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
SDHA-216ENST00000514027 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
SDHA-216ENST00000514027 MT4P47944 62 aa3.13□□□□□ -1.91
SDHA-216ENST00000514027 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
SDHA-216ENST00000514027 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
SDHA-216ENST00000514027 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
SDHA-216ENST00000514027 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
SDHA-216ENST00000514027 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
SDHA-216ENST00000514027 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
SDHA-216ENST00000514027 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
SDHA-216ENST00000514027 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SDHA-216ENST00000514027 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SDHA-216ENST00000514027 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.98
SDHA-216ENST00000514027 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
SDHA-216ENST00000514027 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
SDHA-216ENST00000514027 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
SDHA-216ENST00000514027 LCE1CQ5T751 118 aa2.53□□□□□ -2
SDHA-216ENST00000514027 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
SDHA-216ENST00000514027 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
SDHA-216ENST00000514027 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
SDHA-216ENST00000514027 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
SDHA-216ENST00000514027 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SDHA-216ENST00000514027 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
SDHA-216ENST00000514027 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
SDHA-216ENST00000514027 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SDHA-216ENST00000514027 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
SDHA-216ENST00000514027 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 35.9 ms