RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 KRTAP19-2Q3LHN2 52 aa1.16□□□□□ -2.22
PROM1-216ENST00000513946 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
PROM1-216ENST00000513946 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
PROM1-216ENST00000513946 PLECQ15149 4684 aaKnown RBP1.16□□□□□ -2.22
PROM1-216ENST00000513946 GPR98Q8WXG9 6306 aa1.16□□□□□ -2.22
PROM1-216ENST00000513946 EPPK1P58107 5090 aaKnown RBP1.14□□□□□ -2.23
PROM1-216ENST00000513946 RYR2Q92736 4967 aa1.14□□□□□ -2.23
PROM1-216ENST00000513946 HYDINQ4G0P3 5121 aa1.13□□□□□ -2.23
PROM1-216ENST00000513946 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
PROM1-216ENST00000513946 MT1EP04732 61 aa1.11□□□□□ -2.23
PROM1-216ENST00000513946 LRP1Q07954 4544 aaKnown RBP1.1□□□□□ -2.23
PROM1-216ENST00000513946 MT1XP80297 61 aa1.1□□□□□ -2.23
PROM1-216ENST00000513946 HSPG2P98160 4391 aa1.1□□□□□ -2.23
PROM1-216ENST00000513946 DNAH5Q8TE73 4624 aa1.1□□□□□ -2.23
PROM1-216ENST00000513946 APOBP04114 4563 aaKnown RBP1.1□□□□□ -2.23
PROM1-216ENST00000513946 MT1LQ93083 61 aa1.09□□□□□ -2.23
PROM1-216ENST00000513946 TNXBP22105 4242 aa1.09□□□□□ -2.24
PROM1-216ENST00000513946 BIRC6Q9NR09 4857 aa1.09□□□□□ -2.24
PROM1-216ENST00000513946 RYR1P21817 5038 aa1.08□□□□□ -2.24
PROM1-216ENST00000513946 HERC2O95714 4834 aa1.08□□□□□ -2.24
PROM1-216ENST00000513946 MYCBP2O75592 4640 aa1.08□□□□□ -2.24
PROM1-216ENST00000513946 KIAA1109Q2LD37 5005 aa1.07□□□□□ -2.24
PROM1-216ENST00000513946 PCLOQ9Y6V0 5065 aa1.07□□□□□ -2.24
PROM1-216ENST00000513946 MT2AP02795 61 aa1.07□□□□□ -2.24
PROM1-216ENST00000513946 MT1AP04731 61 aa1.07□□□□□ -2.24
PROM1-216ENST00000513946 MT1HP80294 61 aa1.07□□□□□ -2.24
PROM1-216ENST00000513946 DYNC1H1Q14204 4646 aaKnown RBP1.06□□□□□ -2.24
PROM1-216ENST00000513946 KRTAP19-5Q3LI72 72 aa1.06□□□□□ -2.24
PROM1-216ENST00000513946 FAT3Q8TDW7 4589 aa1.06□□□□□ -2.24
PROM1-216ENST00000513946 ABCA13Q86UQ4 5058 aa1.06□□□□□ -2.24
PROM1-216ENST00000513946 MT1BP07438 61 aa1.05□□□□□ -2.24
PROM1-216ENST00000513946 MT1FP04733 61 aa1.04□□□□□ -2.24
PROM1-216ENST00000513946 HERC1Q15751 4861 aa1.04□□□□□ -2.24
PROM1-216ENST00000513946 FAT1Q14517 4588 aa1.03□□□□□ -2.24
PROM1-216ENST00000513946 MT1GP13640 62 aa1.02□□□□□ -2.25
PROM1-216ENST00000513946 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
PROM1-216ENST00000513946 LRP2P98164 4655 aa0.98□□□□□ -2.25
PROM1-216ENST00000513946 UBR4Q5T4S7 5183 aa0.97□□□□□ -2.25
PROM1-216ENST00000513946 SPRR2AP35326 72 aa0.97□□□□□ -2.25
PROM1-216ENST00000513946 HMCN2Q8NDA2 5059 aa0.96□□□□□ -2.26
PROM1-216ENST00000513946 KRTAP19-7Q3SYF9 63 aa0.96□□□□□ -2.26
PROM1-216ENST00000513946 MT1MQ8N339 61 aa0.96□□□□□ -2.26
PROM1-216ENST00000513946 MUC17Q685J3 4493 aa0.95□□□□□ -2.26
PROM1-216ENST00000513946 MUC2Q02817 5179 aa0.94□□□□□ -2.26
PROM1-216ENST00000513946 KRTAP19-3Q7Z4W3 81 aa0.94□□□□□ -2.26
PROM1-216ENST00000513946 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
PROM1-216ENST00000513946 RNF213Q63HN8 5207 aa0.93□□□□□ -2.26
PROM1-216ENST00000513946 SPRR2BP35325 72 aa0.93□□□□□ -2.26
PROM1-216ENST00000513946 LPAP08519 4548 aa0.93□□□□□ -2.26
PROM1-216ENST00000513946 PRM1P04553 51 aa0.9□□□□□ -2.27
PROM1-216ENST00000513946 KRTAP19-6Q3LI70 58 aa0.89□□□□□ -2.27
PROM1-216ENST00000513946 SPRR2EP22531 72 aa0.88□□□□□ -2.27
PROM1-216ENST00000513946 MACF1Q9UPN3 7388 aaKnown RBP0.87□□□□□ -2.27
PROM1-216ENST00000513946 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
PROM1-216ENST00000513946 FAT4Q6V0I7 4981 aa0.86□□□□□ -2.27
PROM1-216ENST00000513946 SPRR2DP22532 72 aa0.86□□□□□ -2.27
PROM1-216ENST00000513946 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
PROM1-216ENST00000513946 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
PROM1-216ENST00000513946 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
PROM1-216ENST00000513946 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
PROM1-216ENST00000513946 SYNE2Q8WXH0 6885 aaKnown RBP0.78□□□□□ -2.29
PROM1-216ENST00000513946 FSIP2Q5CZC0 6907 aa0.77□□□□□ -2.29
PROM1-216ENST00000513946 KRTAP6-1Q3LI64 71 aa0.77□□□□□ -2.29
PROM1-216ENST00000513946 USH2AO75445 5202 aa0.77□□□□□ -2.29
PROM1-216ENST00000513946 SSPOA2VEC9 5147 aa0.76□□□□□ -2.29
PROM1-216ENST00000513946 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
PROM1-216ENST00000513946 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
PROM1-216ENST00000513946 NEBP20929 6669 aa0.72□□□□□ -2.29
PROM1-216ENST00000513946 KMT2DO14686 5537 aa0.68□□□□□ -2.3
PROM1-216ENST00000513946 MDN1Q9NU22 5596 aa0.67□□□□□ -2.3
PROM1-216ENST00000513946 MUC12Q9UKN1 5478 aa0.66□□□□□ -2.3
PROM1-216ENST00000513946 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
PROM1-216ENST00000513946 KRTAP20-1Q3LI63 56 aa0.6□□□□□ -2.31
PROM1-216ENST00000513946 MUC5ACP98088 5654 aa0.6□□□□□ -2.31
PROM1-216ENST00000513946 KRTAP20-2Q3LI61 65 aa0.58□□□□□ -2.32
PROM1-216ENST00000513946 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
PROM1-216ENST00000513946 MT4P47944 62 aa0.5□□□□□ -2.33
PROM1-216ENST00000513946 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 71.1 ms