RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 HERC1Q15751 4861 aa1.05□□□□□ -2.24
AFP-205ENST00000513720 MUC17Q685J3 4493 aa1.05□□□□□ -2.24
AFP-205ENST00000513720 KRTAP4-3Q9BYR4 195 aa1.05□□□□□ -2.24
AFP-205ENST00000513720 KRTAP6-2Q3LI66 62 aa1.03□□□□□ -2.24
AFP-205ENST00000513720 SPRR2BP35325 72 aa1.02□□□□□ -2.25
AFP-205ENST00000513720 MT1EP04732 61 aa1.01□□□□□ -2.25
AFP-205ENST00000513720 SPRR2DP22532 72 aa1.01□□□□□ -2.25
AFP-205ENST00000513720 SPRR2AP35326 72 aa1.01□□□□□ -2.25
AFP-205ENST00000513720 SPRR2FQ96RM1 72 aa0.99□□□□□ -2.25
AFP-205ENST00000513720 MT1XP80297 61 aa0.98□□□□□ -2.25
AFP-205ENST00000513720 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
AFP-205ENST00000513720 MT1LQ93083 61 aa0.98□□□□□ -2.25
AFP-205ENST00000513720 KRTAP19-8Q3LI54 63 aa0.97□□□□□ -2.25
AFP-205ENST00000513720 LCE1CQ5T751 118 aa0.97□□□□□ -2.25
AFP-205ENST00000513720 LCE1BQ5T7P3 118 aa0.97□□□□□ -2.25
AFP-205ENST00000513720 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
AFP-205ENST00000513720 OBSCNQ5VST9 7968 aa0.96□□□□□ -2.26
AFP-205ENST00000513720 LRP1BQ9NZR2 4599 aa0.95□□□□□ -2.26
AFP-205ENST00000513720 KRTAP5-8O75690 187 aa0.95□□□□□ -2.26
AFP-205ENST00000513720 SPRR2EP22531 72 aa0.93□□□□□ -2.26
AFP-205ENST00000513720 LRP2P98164 4655 aa0.92□□□□□ -2.26
AFP-205ENST00000513720 MT1HP80294 61 aa0.91□□□□□ -2.26
AFP-205ENST00000513720 KRTAP19-2Q3LHN2 52 aa0.9□□□□□ -2.27
AFP-205ENST00000513720 MT1GP13640 62 aa0.88□□□□□ -2.27
AFP-205ENST00000513720 CRCT1Q9UGL9 99 aa0.87□□□□□ -2.27
AFP-205ENST00000513720 HYDINQ4G0P3 5121 aa0.86□□□□□ -2.27
AFP-205ENST00000513720 MT1BP07438 61 aa0.86□□□□□ -2.27
AFP-205ENST00000513720 KRTAP4-1Q9BYQ7 146 aa0.85□□□□□ -2.27
AFP-205ENST00000513720 MUC2Q02817 5179 aa0.84□□□□□ -2.27
AFP-205ENST00000513720 HMCN1Q96RW7 5635 aa0.84□□□□□ -2.27
AFP-205ENST00000513720 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
AFP-205ENST00000513720 KRTAP19-7Q3SYF9 63 aa0.84□□□□□ -2.27
AFP-205ENST00000513720 MT1HL1P0DM35 61 aa0.83□□□□□ -2.28
AFP-205ENST00000513720 HMCN2Q8NDA2 5059 aa0.81□□□□□ -2.28
AFP-205ENST00000513720 DNHD1Q96M86 4753 aa0.79□□□□□ -2.28
AFP-205ENST00000513720 MT2AP02795 61 aa0.79□□□□□ -2.28
AFP-205ENST00000513720 MT1FP04733 61 aa0.78□□□□□ -2.28
AFP-205ENST00000513720 PCLOQ9Y6V0 5065 aa0.78□□□□□ -2.29
AFP-205ENST00000513720 USH2AO75445 5202 aa0.77□□□□□ -2.29
AFP-205ENST00000513720 MT1MQ8N339 61 aa0.76□□□□□ -2.29
AFP-205ENST00000513720 BIRC6Q9NR09 4857 aa0.75□□□□□ -2.29
AFP-205ENST00000513720 RYR3Q15413 4870 aa0.75□□□□□ -2.29
AFP-205ENST00000513720 KRTAP6-1Q3LI64 71 aa0.74□□□□□ -2.29
AFP-205ENST00000513720 HERC2O95714 4834 aa0.73□□□□□ -2.29
AFP-205ENST00000513720 KMT2CQ8NEZ4 4911 aaKnown RBP0.72□□□□□ -2.29
AFP-205ENST00000513720 RYR1P21817 5038 aa0.7□□□□□ -2.3
AFP-205ENST00000513720 SSPOA2VEC9 5147 aa0.69□□□□□ -2.3
AFP-205ENST00000513720 FAT4Q6V0I7 4981 aa0.68□□□□□ -2.3
AFP-205ENST00000513720 MDN1Q9NU22 5596 aa0.68□□□□□ -2.3
AFP-205ENST00000513720 MUC19Q7Z5P9 8384 aa0.68□□□□□ -2.3
AFP-205ENST00000513720 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
AFP-205ENST00000513720 UBR4Q5T4S7 5183 aa0.65□□□□□ -2.31
AFP-205ENST00000513720 RNF213Q63HN8 5207 aa0.64□□□□□ -2.31
AFP-205ENST00000513720 FCGBPQ9Y6R7 5405 aaPredicted RBP0.64□□□□□ -2.31
AFP-205ENST00000513720 RYR2Q92736 4967 aa0.59□□□□□ -2.32
AFP-205ENST00000513720 EPPK1P58107 5090 aaKnown RBP0.58□□□□□ -2.32
AFP-205ENST00000513720 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
AFP-205ENST00000513720 KMT2DO14686 5537 aa0.57□□□□□ -2.32
AFP-205ENST00000513720 ABCA13Q86UQ4 5058 aa0.56□□□□□ -2.32
AFP-205ENST00000513720 KRTAP5-7Q6L8G8 165 aa0.53□□□□□ -2.32
AFP-205ENST00000513720 KRTAP21-2Q3LI59 83 aa0.52□□□□□ -2.33
AFP-205ENST00000513720 KIAA1109Q2LD37 5005 aa0.51□□□□□ -2.33
AFP-205ENST00000513720 MUC12Q9UKN1 5478 aa0.49□□□□□ -2.33
AFP-205ENST00000513720 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
AFP-205ENST00000513720 AHNAK2Q8IVF2 5795 aa0.43□□□□□ -2.34
AFP-205ENST00000513720 KRTAP19-6Q3LI70 58 aa0.38□□□□□ -2.35
AFP-205ENST00000513720 MUC16Q8WXI7 14507 aa0.36□□□□□ -2.35
AFP-205ENST00000513720 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
AFP-205ENST00000513720 MT4P47944 62 aa0.33□□□□□ -2.36
AFP-205ENST00000513720 KRTAP20-2Q3LI61 65 aa0.33□□□□□ -2.36
AFP-205ENST00000513720 AHNAKQ09666 5890 aaKnown RBP0.33□□□□□ -2.36
AFP-205ENST00000513720 DSTQ03001 7570 aaKnown RBP0.32□□□□□ -2.36
AFP-205ENST00000513720 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
AFP-205ENST00000513720 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
AFP-205ENST00000513720 GPR98Q8WXG9 6306 aa0.16□□□□□ -2.38
AFP-205ENST00000513720 KRTAP20-1Q3LI63 56 aa0.16□□□□□ -2.38
AFP-205ENST00000513720 NEBP20929 6669 aa0.13□□□□□ -2.39
AFP-205ENST00000513720 MACF1Q9UPN3 7388 aaKnown RBP0.12□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 190.9 ms