RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 MUC17Q685J3 4493 aa1.46□□□□□ -2.17
PDS5A-209ENST00000512643 LRP1BQ9NZR2 4599 aa1.46□□□□□ -2.18
PDS5A-209ENST00000512643 PKHD1P08F94 4074 aa1.45□□□□□ -2.18
PDS5A-209ENST00000512643 FAT1Q14517 4588 aa1.44□□□□□ -2.18
PDS5A-209ENST00000512643 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
PDS5A-209ENST00000512643 PCLOQ9Y6V0 5065 aa1.44□□□□□ -2.18
PDS5A-209ENST00000512643 RYR1P21817 5038 aa1.44□□□□□ -2.18
PDS5A-209ENST00000512643 KRTAP19-5Q3LI72 72 aa1.43□□□□□ -2.18
PDS5A-209ENST00000512643 HERC1Q15751 4861 aa1.43□□□□□ -2.18
PDS5A-209ENST00000512643 PRM1P04553 51 aa1.42□□□□□ -2.18
PDS5A-209ENST00000512643 KIAA1109Q2LD37 5005 aa1.4□□□□□ -2.19
PDS5A-209ENST00000512643 DNHD1Q96M86 4753 aa1.39□□□□□ -2.19
PDS5A-209ENST00000512643 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
PDS5A-209ENST00000512643 MT1AP04731 61 aa1.34□□□□□ -2.19
PDS5A-209ENST00000512643 RYR3Q15413 4870 aa1.31□□□□□ -2.2
PDS5A-209ENST00000512643 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
PDS5A-209ENST00000512643 MUC2Q02817 5179 aa1.28□□□□□ -2.2
PDS5A-209ENST00000512643 BIRC6Q9NR09 4857 aa1.28□□□□□ -2.2
PDS5A-209ENST00000512643 HYDINQ4G0P3 5121 aa1.27□□□□□ -2.21
PDS5A-209ENST00000512643 LRP2P98164 4655 aa1.27□□□□□ -2.21
PDS5A-209ENST00000512643 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
PDS5A-209ENST00000512643 KRTAP19-8Q3LI54 63 aa1.25□□□□□ -2.21
PDS5A-209ENST00000512643 MT1EP04732 61 aa1.24□□□□□ -2.21
PDS5A-209ENST00000512643 MT1XP80297 61 aa1.24□□□□□ -2.21
PDS5A-209ENST00000512643 GPR98Q8WXG9 6306 aa1.23□□□□□ -2.21
PDS5A-209ENST00000512643 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
PDS5A-209ENST00000512643 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
PDS5A-209ENST00000512643 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
PDS5A-209ENST00000512643 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
PDS5A-209ENST00000512643 RYR2Q92736 4967 aa1.21□□□□□ -2.22
PDS5A-209ENST00000512643 KMT2CQ8NEZ4 4911 aaKnown RBP1.2□□□□□ -2.22
PDS5A-209ENST00000512643 MT1LQ93083 61 aa1.2□□□□□ -2.22
PDS5A-209ENST00000512643 SPRR2BP35325 72 aa1.18□□□□□ -2.22
PDS5A-209ENST00000512643 SPRR2AP35326 72 aa1.18□□□□□ -2.22
PDS5A-209ENST00000512643 SPRR2FQ96RM1 72 aa1.18□□□□□ -2.22
PDS5A-209ENST00000512643 SPRR2DP22532 72 aa1.17□□□□□ -2.22
PDS5A-209ENST00000512643 ABCA13Q86UQ4 5058 aa1.17□□□□□ -2.22
PDS5A-209ENST00000512643 CRCT1Q9UGL9 99 aa1.13□□□□□ -2.23
PDS5A-209ENST00000512643 HERC2O95714 4834 aa1.13□□□□□ -2.23
PDS5A-209ENST00000512643 MT1BP07438 61 aa1.12□□□□□ -2.23
PDS5A-209ENST00000512643 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
PDS5A-209ENST00000512643 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
PDS5A-209ENST00000512643 FAT4Q6V0I7 4981 aa1.11□□□□□ -2.23
PDS5A-209ENST00000512643 MT1HL1P0DM35 61 aa1.11□□□□□ -2.23
PDS5A-209ENST00000512643 SPRR2EP22531 72 aa1.09□□□□□ -2.23
PDS5A-209ENST00000512643 MT1HP80294 61 aa1.09□□□□□ -2.23
PDS5A-209ENST00000512643 KRTAP19-7Q3SYF9 63 aa1.08□□□□□ -2.24
PDS5A-209ENST00000512643 FSIP2Q5CZC0 6907 aa1.08□□□□□ -2.24
PDS5A-209ENST00000512643 NEBP20929 6669 aa1.07□□□□□ -2.24
PDS5A-209ENST00000512643 SYNE2Q8WXH0 6885 aaKnown RBP1.06□□□□□ -2.24
PDS5A-209ENST00000512643 HMCN2Q8NDA2 5059 aa1.05□□□□□ -2.24
PDS5A-209ENST00000512643 MT1GP13640 62 aa1.03□□□□□ -2.24
PDS5A-209ENST00000512643 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
PDS5A-209ENST00000512643 MACF1Q9UPN3 7388 aaKnown RBP1.01□□□□□ -2.25
PDS5A-209ENST00000512643 MT2AP02795 61 aa1.01□□□□□ -2.25
PDS5A-209ENST00000512643 RNF213Q63HN8 5207 aa1□□□□□ -2.25
PDS5A-209ENST00000512643 MT1FP04733 61 aa1□□□□□ -2.25
PDS5A-209ENST00000512643 SSPOA2VEC9 5147 aa0.98□□□□□ -2.25
PDS5A-209ENST00000512643 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
PDS5A-209ENST00000512643 USH2AO75445 5202 aa0.94□□□□□ -2.26
PDS5A-209ENST00000512643 MT1MQ8N339 61 aa0.94□□□□□ -2.26
PDS5A-209ENST00000512643 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
PDS5A-209ENST00000512643 FCGBPQ9Y6R7 5405 aaPredicted RBP0.93□□□□□ -2.26
PDS5A-209ENST00000512643 KRTAP6-1Q3LI64 71 aa0.92□□□□□ -2.26
PDS5A-209ENST00000512643 KMT2DO14686 5537 aa0.88□□□□□ -2.27
PDS5A-209ENST00000512643 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
PDS5A-209ENST00000512643 MDN1Q9NU22 5596 aa0.86□□□□□ -2.27
PDS5A-209ENST00000512643 KRTAP20-1Q3LI63 56 aa0.86□□□□□ -2.27
PDS5A-209ENST00000512643 DSTQ03001 7570 aaKnown RBP0.84□□□□□ -2.28
PDS5A-209ENST00000512643 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
PDS5A-209ENST00000512643 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
PDS5A-209ENST00000512643 HMCN1Q96RW7 5635 aa0.79□□□□□ -2.28
PDS5A-209ENST00000512643 MUC5ACP98088 5654 aa0.78□□□□□ -2.29
PDS5A-209ENST00000512643 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
PDS5A-209ENST00000512643 KRTAP19-6Q3LI70 58 aa0.56□□□□□ -2.32
PDS5A-209ENST00000512643 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
PDS5A-209ENST00000512643 MT4P47944 62 aa0.41□□□□□ -2.34
PDS5A-209ENST00000512643 KRTAP20-2Q3LI61 65 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 538 ms