RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
NEK1-208ENST00000512193 SPRR2EP22531 72 aa2.63□□□□□ -1.99
NEK1-208ENST00000512193 SPRR2BP35325 72 aa2.63□□□□□ -1.99
NEK1-208ENST00000512193 SPRR2AP35326 72 aa2.63□□□□□ -1.99
NEK1-208ENST00000512193 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
NEK1-208ENST00000512193 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
NEK1-208ENST00000512193 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
NEK1-208ENST00000512193 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
NEK1-208ENST00000512193 MT1MQ8N339 61 aa2.54□□□□□ -2
NEK1-208ENST00000512193 SPRR2DP22532 72 aa2.52□□□□□ -2.01
NEK1-208ENST00000512193 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
NEK1-208ENST00000512193 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
NEK1-208ENST00000512193 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
NEK1-208ENST00000512193 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
NEK1-208ENST00000512193 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
NEK1-208ENST00000512193 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
NEK1-208ENST00000512193 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
NEK1-208ENST00000512193 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
NEK1-208ENST00000512193 KRTAP9-2Q9BYQ4 174 aa2.43□□□□□ -2.02
NEK1-208ENST00000512193 USH2AO75445 5202 aa2.43□□□□□ -2.02
NEK1-208ENST00000512193 KRTAP4-9Q9BYQ8 210 aa2.41□□□□□ -2.02
NEK1-208ENST00000512193 KMT2DO14686 5537 aa2.4□□□□□ -2.02
NEK1-208ENST00000512193 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.03
NEK1-208ENST00000512193 PRM1P04553 51 aa2.37□□□□□ -2.03
NEK1-208ENST00000512193 MT3P25713 68 aa2.35□□□□□ -2.03
NEK1-208ENST00000512193 MT1AP04731 61 aa2.33□□□□□ -2.04
NEK1-208ENST00000512193 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
NEK1-208ENST00000512193 MT4P47944 62 aa2.3□□□□□ -2.04
NEK1-208ENST00000512193 KRTAP9-6A0A140TA67 174 aa2.29□□□□□ -2.04
NEK1-208ENST00000512193 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
NEK1-208ENST00000512193 LCE5AQ5TCM9 118 aa2.26□□□□□ -2.05
NEK1-208ENST00000512193 MUC12Q9UKN1 5478 aa2.26□□□□□ -2.05
NEK1-208ENST00000512193 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.21□□□□□ -2.06
NEK1-208ENST00000512193 LCE1DQ5T752 114 aa2.21□□□□□ -2.06
NEK1-208ENST00000512193 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
NEK1-208ENST00000512193 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
NEK1-208ENST00000512193 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
NEK1-208ENST00000512193 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
NEK1-208ENST00000512193 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
NEK1-208ENST00000512193 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
NEK1-208ENST00000512193 KRTAP9-7A8MTY7 169 aa2.16□□□□□ -2.06
NEK1-208ENST00000512193 KRTAP9-4Q9BYQ2 154 aa2.14□□□□□ -2.07
NEK1-208ENST00000512193 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
NEK1-208ENST00000512193 LCE4AQ5TA78 99 aa2.09□□□□□ -2.08
NEK1-208ENST00000512193 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
NEK1-208ENST00000512193 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
NEK1-208ENST00000512193 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
NEK1-208ENST00000512193 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
NEK1-208ENST00000512193 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
NEK1-208ENST00000512193 KRTAP5-9P26371 169 aa1.94□□□□□ -2.1
NEK1-208ENST00000512193 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
NEK1-208ENST00000512193 KRTAP2-2Q9BYT5 123 aa1.92□□□□□ -2.1
NEK1-208ENST00000512193 NEBP20929 6669 aa1.85□□□□□ -2.11
NEK1-208ENST00000512193 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
NEK1-208ENST00000512193 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
NEK1-208ENST00000512193 KRTAP4-11Q9BYQ6 195 aa1.79□□□□□ -2.12
NEK1-208ENST00000512193 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
NEK1-208ENST00000512193 LCE1EQ5T753 118 aa1.75□□□□□ -2.13
NEK1-208ENST00000512193 LCE1FQ5T754 118 aa1.75□□□□□ -2.13
NEK1-208ENST00000512193 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
NEK1-208ENST00000512193 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
NEK1-208ENST00000512193 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.15
NEK1-208ENST00000512193 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
NEK1-208ENST00000512193 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
NEK1-208ENST00000512193 KRTAP5-4Q6L8H1 288 aa1.6□□□□□ -2.15
NEK1-208ENST00000512193 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
NEK1-208ENST00000512193 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
NEK1-208ENST00000512193 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
NEK1-208ENST00000512193 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
NEK1-208ENST00000512193 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
NEK1-208ENST00000512193 KRTAP5-8O75690 187 aa1.34□□□□□ -2.19
NEK1-208ENST00000512193 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
NEK1-208ENST00000512193 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
NEK1-208ENST00000512193 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
NEK1-208ENST00000512193 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
NEK1-208ENST00000512193 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
NEK1-208ENST00000512193 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 189.8 ms