RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MT4P47944 62 aa1.94□□□□□ -2.1
USP38-203ENST00000511739 KRTAP4-8A0A0G2JLE6 195 aa1.93□□□□□ -2.1
USP38-203ENST00000511739 KRTAP4-8Q9BYQ9 185 aa1.93□□□□□ -2.1
USP38-203ENST00000511739 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
USP38-203ENST00000511739 MUC2Q02817 5179 aa1.9□□□□□ -2.1
USP38-203ENST00000511739 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.1
USP38-203ENST00000511739 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
USP38-203ENST00000511739 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
USP38-203ENST00000511739 MT3P25713 68 aa1.88□□□□□ -2.11
USP38-203ENST00000511739 LCE1DQ5T752 114 aa1.87□□□□□ -2.11
USP38-203ENST00000511739 KRTAP19-6Q3LI70 58 aa1.85□□□□□ -2.11
USP38-203ENST00000511739 MT1LQ93083 61 aa1.83□□□□□ -2.12
USP38-203ENST00000511739 MT1EP04732 61 aa1.83□□□□□ -2.12
USP38-203ENST00000511739 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
USP38-203ENST00000511739 LCE5AQ5TCM9 118 aa1.81□□□□□ -2.12
USP38-203ENST00000511739 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
USP38-203ENST00000511739 KRTAP4-7Q9BYR0 210 aa1.79□□□□□ -2.12
USP38-203ENST00000511739 MT1MQ8N339 61 aa1.77□□□□□ -2.13
USP38-203ENST00000511739 SYNE1Q8NF91 8797 aaKnown RBP1.77□□□□□ -2.13
USP38-203ENST00000511739 PRM1P04553 51 aa1.76□□□□□ -2.13
USP38-203ENST00000511739 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
USP38-203ENST00000511739 LOC100996750A0A140TA64 210 aa1.76□□□□□ -2.13
USP38-203ENST00000511739 KRTAP4-6Q9BYQ5 205 aa1.76□□□□□ -2.13
USP38-203ENST00000511739 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
USP38-203ENST00000511739 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
USP38-203ENST00000511739 LCE1EQ5T753 118 aa1.71□□□□□ -2.14
USP38-203ENST00000511739 LCE1FQ5T754 118 aa1.71□□□□□ -2.14
USP38-203ENST00000511739 LCE1AQ5T7P2 110 aa1.71□□□□□ -2.14
USP38-203ENST00000511739 MACF1Q9UPN3 7388 aaKnown RBP1.71□□□□□ -2.14
USP38-203ENST00000511739 KRTAP4-3Q9BYR4 195 aa1.68□□□□□ -2.14
USP38-203ENST00000511739 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
USP38-203ENST00000511739 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
USP38-203ENST00000511739 KRTAP2-1Q9BYU5 128 aa1.68□□□□□ -2.14
USP38-203ENST00000511739 MT1AP04731 61 aa1.67□□□□□ -2.14
USP38-203ENST00000511739 USH2AO75445 5202 aa1.65□□□□□ -2.15
USP38-203ENST00000511739 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
USP38-203ENST00000511739 KRTAP4-9Q9BYQ8 210 aa1.62□□□□□ -2.15
USP38-203ENST00000511739 LCE4AQ5TA78 99 aa1.61□□□□□ -2.15
USP38-203ENST00000511739 KRTAP2-2Q9BYT5 123 aa1.61□□□□□ -2.15
USP38-203ENST00000511739 NEBP20929 6669 aa1.61□□□□□ -2.15
USP38-203ENST00000511739 KMT2DO14686 5537 aa1.6□□□□□ -2.15
USP38-203ENST00000511739 KRTAP9-6A8MVA2 160 aa1.6□□□□□ -2.15
USP38-203ENST00000511739 SSPOA2VEC9 5147 aa1.59□□□□□ -2.16
USP38-203ENST00000511739 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
USP38-203ENST00000511739 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
USP38-203ENST00000511739 KRTAP4-12Q9BQ66 201 aa1.54□□□□□ -2.16
USP38-203ENST00000511739 KRTAP9-9Q9BYP9 154 aa1.53□□□□□ -2.16
USP38-203ENST00000511739 KRTAP9-4Q9BYQ2 154 aa1.53□□□□□ -2.16
USP38-203ENST00000511739 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
USP38-203ENST00000511739 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
USP38-203ENST00000511739 KRTAP5-9P26371 169 aa1.5□□□□□ -2.17
USP38-203ENST00000511739 MUC12Q9UKN1 5478 aa1.48□□□□□ -2.17
USP38-203ENST00000511739 GPR98Q8WXG9 6306 aa1.43□□□□□ -2.18
USP38-203ENST00000511739 MDN1Q9NU22 5596 aa1.39□□□□□ -2.19
USP38-203ENST00000511739 KRTAP5-3Q6L8H2 238 aa1.37□□□□□ -2.19
USP38-203ENST00000511739 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
USP38-203ENST00000511739 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
USP38-203ENST00000511739 KRTAP5-5Q701N2 237 aaPredicted RBP1.32□□□□□ -2.2
USP38-203ENST00000511739 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
USP38-203ENST00000511739 KRTAP4-2Q9BYR5 136 aa1.32□□□□□ -2.2
USP38-203ENST00000511739 KRTAP4-11Q9BYQ6 195 aa1.3□□□□□ -2.2
USP38-203ENST00000511739 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.21
USP38-203ENST00000511739 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
USP38-203ENST00000511739 KRTAP5-4Q6L8H1 288 aa1.24□□□□□ -2.21
USP38-203ENST00000511739 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
USP38-203ENST00000511739 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
USP38-203ENST00000511739 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
USP38-203ENST00000511739 AHNAK2Q8IVF2 5795 aa1.15□□□□□ -2.23
USP38-203ENST00000511739 KRTAP5-7Q6L8G8 165 aa1.11□□□□□ -2.23
USP38-203ENST00000511739 KRTAP5-8O75690 187 aa1.1□□□□□ -2.23
USP38-203ENST00000511739 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
USP38-203ENST00000511739 PHGR1C9JFL3 82 aa1.03□□□□□ -2.25
USP38-203ENST00000511739 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
USP38-203ENST00000511739 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
USP38-203ENST00000511739 KRTAP5-11Q6L8G4 156 aa0.93□□□□□ -2.26
USP38-203ENST00000511739 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
USP38-203ENST00000511739 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
USP38-203ENST00000511739 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms