RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 HERC1Q15751 4861 aa1.58□□□□□ -2.16
SPARCL1-206ENST00000509407 PKHD1L1Q86WI1 4243 aa1.58□□□□□ -2.16
SPARCL1-206ENST00000509407 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
SPARCL1-206ENST00000509407 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
SPARCL1-206ENST00000509407 HMCN2Q8NDA2 5059 aa1.54□□□□□ -2.16
SPARCL1-206ENST00000509407 UBR4Q5T4S7 5183 aa1.53□□□□□ -2.16
SPARCL1-206ENST00000509407 RNF213Q63HN8 5207 aa1.53□□□□□ -2.16
SPARCL1-206ENST00000509407 MT1HL1P0DM35 61 aa1.53□□□□□ -2.16
SPARCL1-206ENST00000509407 RPS29P62273 56 aaKnown RBP1.53□□□□□ -2.16
SPARCL1-206ENST00000509407 FAT1Q14517 4588 aa1.52□□□□□ -2.17
SPARCL1-206ENST00000509407 FAT3Q8TDW7 4589 aa1.51□□□□□ -2.17
SPARCL1-206ENST00000509407 M0R2T5 61 aa1.5□□□□□ -2.17
SPARCL1-206ENST00000509407 TNXBP22105 4242 aa1.49□□□□□ -2.17
SPARCL1-206ENST00000509407 TNP1P09430 55 aa1.49□□□□□ -2.17
SPARCL1-206ENST00000509407 LRP1Q07954 4544 aaKnown RBP1.48□□□□□ -2.17
SPARCL1-206ENST00000509407 C9orf92A6NGG3 77 aa1.47□□□□□ -2.17
SPARCL1-206ENST00000509407 LRP2P98164 4655 aa1.46□□□□□ -2.18
SPARCL1-206ENST00000509407 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
SPARCL1-206ENST00000509407 FAT4Q6V0I7 4981 aa1.4□□□□□ -2.19
SPARCL1-206ENST00000509407 KRTAP2-3P0C7H8 128 aa1.39□□□□□ -2.19
SPARCL1-206ENST00000509407 KRTAP2-4Q9BYR9 128 aa1.39□□□□□ -2.19
SPARCL1-206ENST00000509407 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
SPARCL1-206ENST00000509407 MUC2Q02817 5179 aa1.38□□□□□ -2.19
SPARCL1-206ENST00000509407 LPAP08519 4548 aa1.38□□□□□ -2.19
SPARCL1-206ENST00000509407 HMCN1Q96RW7 5635 aa1.36□□□□□ -2.19
SPARCL1-206ENST00000509407 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
SPARCL1-206ENST00000509407 FSIP2Q5CZC0 6907 aa1.34□□□□□ -2.2
SPARCL1-206ENST00000509407 MT1HP80294 61 aa1.33□□□□□ -2.2
SPARCL1-206ENST00000509407 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
SPARCL1-206ENST00000509407 FLGP20930 4061 aaPredicted RBP1.32□□□□□ -2.2
SPARCL1-206ENST00000509407 PRM1P04553 51 aa1.25□□□□□ -2.21
SPARCL1-206ENST00000509407 SYNE2Q8WXH0 6885 aaKnown RBP1.25□□□□□ -2.21
SPARCL1-206ENST00000509407 MT2AP02795 61 aa1.23□□□□□ -2.21
SPARCL1-206ENST00000509407 KRTAP19-2Q3LHN2 52 aa1.23□□□□□ -2.21
SPARCL1-206ENST00000509407 USH2AO75445 5202 aa1.23□□□□□ -2.21
SPARCL1-206ENST00000509407 KRTAP8-1Q8IUC2 63 aa1.22□□□□□ -2.21
SPARCL1-206ENST00000509407 MACF1Q9UPN3 7388 aaKnown RBP1.22□□□□□ -2.21
SPARCL1-206ENST00000509407 FCGBPQ9Y6R7 5405 aaPredicted RBP1.2□□□□□ -2.22
SPARCL1-206ENST00000509407 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
SPARCL1-206ENST00000509407 MT1FP04733 61 aa1.2□□□□□ -2.22
SPARCL1-206ENST00000509407 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
SPARCL1-206ENST00000509407 KRTAP19-6Q3LI70 58 aa1.17□□□□□ -2.22
SPARCL1-206ENST00000509407 NEBP20929 6669 aa1.17□□□□□ -2.22
SPARCL1-206ENST00000509407 SPRR2GQ9BYE4 73 aa1.14□□□□□ -2.23
SPARCL1-206ENST00000509407 MDN1Q9NU22 5596 aa1.12□□□□□ -2.23
SPARCL1-206ENST00000509407 KRTAP19-8Q3LI54 63 aa1.12□□□□□ -2.23
SPARCL1-206ENST00000509407 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
SPARCL1-206ENST00000509407 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
SPARCL1-206ENST00000509407 SPRR2EP22531 72 aa1.09□□□□□ -2.23
SPARCL1-206ENST00000509407 SPRR2BP35325 72 aa1.09□□□□□ -2.23
SPARCL1-206ENST00000509407 SPRR2AP35326 72 aa1.09□□□□□ -2.23
SPARCL1-206ENST00000509407 SPRR2FQ96RM1 72 aa1.09□□□□□ -2.23
SPARCL1-206ENST00000509407 GPR98Q8WXG9 6306 aa1.09□□□□□ -2.24
SPARCL1-206ENST00000509407 MT1BP07438 61 aa1.08□□□□□ -2.24
SPARCL1-206ENST00000509407 SPRR2DP22532 72 aa1.06□□□□□ -2.24
SPARCL1-206ENST00000509407 KMT2DO14686 5537 aa1.06□□□□□ -2.24
SPARCL1-206ENST00000509407 MT1AP04731 61 aa1.05□□□□□ -2.24
SPARCL1-206ENST00000509407 MT1XP80297 61 aa1.03□□□□□ -2.24
SPARCL1-206ENST00000509407 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
SPARCL1-206ENST00000509407 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
SPARCL1-206ENST00000509407 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
SPARCL1-206ENST00000509407 MT1GP13640 62 aa0.95□□□□□ -2.26
SPARCL1-206ENST00000509407 KRTAP6-2Q3LI66 62 aa0.94□□□□□ -2.26
SPARCL1-206ENST00000509407 MT1EP04732 61 aa0.93□□□□□ -2.26
SPARCL1-206ENST00000509407 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
SPARCL1-206ENST00000509407 MT4P47944 62 aa0.9□□□□□ -2.27
SPARCL1-206ENST00000509407 KRTAP19-7Q3SYF9 63 aa0.9□□□□□ -2.27
SPARCL1-206ENST00000509407 MT1MQ8N339 61 aa0.9□□□□□ -2.27
SPARCL1-206ENST00000509407 MT1LQ93083 61 aa0.88□□□□□ -2.27
SPARCL1-206ENST00000509407 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
SPARCL1-206ENST00000509407 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
SPARCL1-206ENST00000509407 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
SPARCL1-206ENST00000509407 KRTAP20-2Q3LI61 65 aa0.8□□□□□ -2.28
SPARCL1-206ENST00000509407 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
SPARCL1-206ENST00000509407 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
SPARCL1-206ENST00000509407 KRTAP6-1Q3LI64 71 aa0.74□□□□□ -2.29
SPARCL1-206ENST00000509407 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
SPARCL1-206ENST00000509407 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 64 ms