RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
SPARCL1-206ENST00000509407 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
SPARCL1-206ENST00000509407 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
SPARCL1-206ENST00000509407 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
SPARCL1-206ENST00000509407 FOXD1Q16676 465 aa16.55■□□□□ 0.24
SPARCL1-206ENST00000509407 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
SPARCL1-206ENST00000509407 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
SPARCL1-206ENST00000509407 MSH5O43196 834 aa15.53■□□□□ 0.08
SPARCL1-206ENST00000509407 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
SPARCL1-206ENST00000509407 ADRA2BP18089 450 aa15.51■□□□□ 0.07
SPARCL1-206ENST00000509407 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
SPARCL1-206ENST00000509407 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
SPARCL1-206ENST00000509407 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
SPARCL1-206ENST00000509407 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
SPARCL1-206ENST00000509407 PPP4R3CPQ6ZMV5 832 aa14.04□□□□□ -0.16
SPARCL1-206ENST00000509407 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
SPARCL1-206ENST00000509407 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
SPARCL1-206ENST00000509407 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
SPARCL1-206ENST00000509407 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
SPARCL1-206ENST00000509407 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
SPARCL1-206ENST00000509407 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
SPARCL1-206ENST00000509407 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
SPARCL1-206ENST00000509407 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
SPARCL1-206ENST00000509407 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
SPARCL1-206ENST00000509407 KCNA4P22459 653 aa13.16□□□□□ -0.3
SPARCL1-206ENST00000509407 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
SPARCL1-206ENST00000509407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPARCL1-206ENST00000509407 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
SPARCL1-206ENST00000509407 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
SPARCL1-206ENST00000509407 CAPN15O75808 1086 aa12.54□□□□□ -0.4
SPARCL1-206ENST00000509407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
SPARCL1-206ENST00000509407 APLP2Q06481 763 aa12.53□□□□□ -0.4
SPARCL1-206ENST00000509407 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
SPARCL1-206ENST00000509407 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
SPARCL1-206ENST00000509407 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
SPARCL1-206ENST00000509407 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
SPARCL1-206ENST00000509407 DSG3P32926 999 aa12.4□□□□□ -0.42
SPARCL1-206ENST00000509407 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
SPARCL1-206ENST00000509407 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
SPARCL1-206ENST00000509407 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
SPARCL1-206ENST00000509407 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
SPARCL1-206ENST00000509407 ABCB7O75027 752 aa12.23□□□□□ -0.45
SPARCL1-206ENST00000509407 ZBTB22O15209 634 aa12.07□□□□□ -0.48
SPARCL1-206ENST00000509407 POLA2Q14181 598 aa12.05□□□□□ -0.48
SPARCL1-206ENST00000509407 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
SPARCL1-206ENST00000509407 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
SPARCL1-206ENST00000509407 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
SPARCL1-206ENST00000509407 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
SPARCL1-206ENST00000509407 POTEHQ6S545 545 aa11.71□□□□□ -0.53
SPARCL1-206ENST00000509407 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
SPARCL1-206ENST00000509407 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
SPARCL1-206ENST00000509407 FBLN2P98095 1184 aa11.63□□□□□ -0.55
SPARCL1-206ENST00000509407 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
SPARCL1-206ENST00000509407 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
SPARCL1-206ENST00000509407 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
SPARCL1-206ENST00000509407 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
SPARCL1-206ENST00000509407 SPDYE2BA6NHP3 402 aa11.48□□□□□ -0.57
SPARCL1-206ENST00000509407 SPDYE6P0CI01 402 aa11.48□□□□□ -0.57
SPARCL1-206ENST00000509407 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
SPARCL1-206ENST00000509407 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
SPARCL1-206ENST00000509407 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
SPARCL1-206ENST00000509407 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
SPARCL1-206ENST00000509407 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
SPARCL1-206ENST00000509407 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
SPARCL1-206ENST00000509407 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
SPARCL1-206ENST00000509407 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
SPARCL1-206ENST00000509407 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
SPARCL1-206ENST00000509407 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
SPARCL1-206ENST00000509407 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
SPARCL1-206ENST00000509407 HAX1O00165 279 aa11.08□□□□□ -0.64
SPARCL1-206ENST00000509407 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
SPARCL1-206ENST00000509407 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
SPARCL1-206ENST00000509407 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
SPARCL1-206ENST00000509407 STAG3Q9UJ98 1225 aa10.96□□□□□ -0.65
SPARCL1-206ENST00000509407 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
SPARCL1-206ENST00000509407 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
SPARCL1-206ENST00000509407 EVX2Q03828 476 aa10.86□□□□□ -0.67
SPARCL1-206ENST00000509407 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
SPARCL1-206ENST00000509407 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
SPARCL1-206ENST00000509407 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
SPARCL1-206ENST00000509407 PROM2Q8N271 834 aa10.75□□□□□ -0.69
SPARCL1-206ENST00000509407 GABBR2O75899 941 aa10.69□□□□□ -0.7
SPARCL1-206ENST00000509407 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
SPARCL1-206ENST00000509407 CLCN6P51797 869 aa10.64□□□□□ -0.71
SPARCL1-206ENST00000509407 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
SPARCL1-206ENST00000509407 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
SPARCL1-206ENST00000509407 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
SPARCL1-206ENST00000509407 FKBP8Q14318 412 aa10.59□□□□□ -0.71
SPARCL1-206ENST00000509407 MNX1P50219 401 aaPredicted RBP10.58□□□□□ -0.72
SPARCL1-206ENST00000509407 ZNF579Q8NAF0 562 aaKnown RBP10.58□□□□□ -0.72
SPARCL1-206ENST00000509407 MIER1Q8N108 512 aa10.53□□□□□ -0.72
SPARCL1-206ENST00000509407 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
SPARCL1-206ENST00000509407 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
SPARCL1-206ENST00000509407 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
SPARCL1-206ENST00000509407 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
SPARCL1-206ENST00000509407 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
SPARCL1-206ENST00000509407 POTEIP0CG38 1075 aa10.41□□□□□ -0.74
SPARCL1-206ENST00000509407 TSPYL2Q9H2G4 693 aaPredicted RBP10.41□□□□□ -0.74
SPARCL1-206ENST00000509407 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
SPARCL1-206ENST00000509407 LHX8Q68G74 356 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms