RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 KRTAP8-1Q8IUC2 63 aa1.93□□□□□ -2.1
LINC01088-205ENST00000509088 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
LINC01088-205ENST00000509088 FAT1Q14517 4588 aa1.91□□□□□ -2.1
LINC01088-205ENST00000509088 PCLOQ9Y6V0 5065 aa1.89□□□□□ -2.11
LINC01088-205ENST00000509088 SMR3BP02814 79 aaPredicted RBP1.85□□□□□ -2.11
LINC01088-205ENST00000509088 RYR3Q15413 4870 aa1.84□□□□□ -2.12
LINC01088-205ENST00000509088 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
LINC01088-205ENST00000509088 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
LINC01088-205ENST00000509088 HERC1Q15751 4861 aa1.79□□□□□ -2.12
LINC01088-205ENST00000509088 KRTAP2-3P0C7H8 128 aa1.78□□□□□ -2.12
LINC01088-205ENST00000509088 KRTAP2-4Q9BYR9 128 aa1.78□□□□□ -2.12
LINC01088-205ENST00000509088 KRTAP2-1Q9BYU5 128 aa1.78□□□□□ -2.12
LINC01088-205ENST00000509088 HYDINQ4G0P3 5121 aa1.77□□□□□ -2.13
LINC01088-205ENST00000509088 M0R2T5 61 aa1.77□□□□□ -2.13
LINC01088-205ENST00000509088 LPAP08519 4548 aa1.76□□□□□ -2.13
LINC01088-205ENST00000509088 RYR1P21817 5038 aa1.75□□□□□ -2.13
LINC01088-205ENST00000509088 KMT2CQ8NEZ4 4911 aaKnown RBP1.75□□□□□ -2.13
LINC01088-205ENST00000509088 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
LINC01088-205ENST00000509088 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
LINC01088-205ENST00000509088 MT1HL1P0DM35 61 aa1.73□□□□□ -2.13
LINC01088-205ENST00000509088 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
LINC01088-205ENST00000509088 MUC17Q685J3 4493 aa1.7□□□□□ -2.14
LINC01088-205ENST00000509088 LRP2P98164 4655 aa1.69□□□□□ -2.14
LINC01088-205ENST00000509088 MUC2Q02817 5179 aa1.67□□□□□ -2.14
LINC01088-205ENST00000509088 KRTAP19-8Q3LI54 63 aa1.66□□□□□ -2.14
LINC01088-205ENST00000509088 RYR2Q92736 4967 aa1.65□□□□□ -2.14
LINC01088-205ENST00000509088 HERC2O95714 4834 aa1.62□□□□□ -2.15
LINC01088-205ENST00000509088 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
LINC01088-205ENST00000509088 ABCA13Q86UQ4 5058 aa1.58□□□□□ -2.16
LINC01088-205ENST00000509088 MT1XP80297 61 aa1.58□□□□□ -2.16
LINC01088-205ENST00000509088 FSIP2Q5CZC0 6907 aa1.56□□□□□ -2.16
LINC01088-205ENST00000509088 MT1AP04731 61 aa1.51□□□□□ -2.17
LINC01088-205ENST00000509088 MT1EP04732 61 aa1.51□□□□□ -2.17
LINC01088-205ENST00000509088 MT1BP07438 61 aa1.5□□□□□ -2.17
LINC01088-205ENST00000509088 MT1LQ93083 61 aa1.49□□□□□ -2.17
LINC01088-205ENST00000509088 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
LINC01088-205ENST00000509088 GPR98Q8WXG9 6306 aa1.48□□□□□ -2.17
LINC01088-205ENST00000509088 MT2AP02795 61 aa1.47□□□□□ -2.17
LINC01088-205ENST00000509088 HMCN2Q8NDA2 5059 aa1.45□□□□□ -2.18
LINC01088-205ENST00000509088 FAT4Q6V0I7 4981 aa1.44□□□□□ -2.18
LINC01088-205ENST00000509088 MT1FP04733 61 aa1.44□□□□□ -2.18
LINC01088-205ENST00000509088 NEBP20929 6669 aa1.43□□□□□ -2.18
LINC01088-205ENST00000509088 PRM1P04553 51 aa1.41□□□□□ -2.18
LINC01088-205ENST00000509088 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
LINC01088-205ENST00000509088 RNF213Q63HN8 5207 aa1.4□□□□□ -2.19
LINC01088-205ENST00000509088 MT1HP80294 61 aa1.4□□□□□ -2.19
LINC01088-205ENST00000509088 KRTAP19-7Q3SYF9 63 aa1.4□□□□□ -2.19
LINC01088-205ENST00000509088 SYNE2Q8WXH0 6885 aaKnown RBP1.38□□□□□ -2.19
LINC01088-205ENST00000509088 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
LINC01088-205ENST00000509088 SPRR2AP35326 72 aa1.33□□□□□ -2.2
LINC01088-205ENST00000509088 SPRR2FQ96RM1 72 aa1.33□□□□□ -2.2
LINC01088-205ENST00000509088 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
LINC01088-205ENST00000509088 MT1GP13640 62 aa1.32□□□□□ -2.2
LINC01088-205ENST00000509088 SPRR2BP35325 72 aa1.29□□□□□ -2.2
LINC01088-205ENST00000509088 MT1MQ8N339 61 aa1.27□□□□□ -2.21
LINC01088-205ENST00000509088 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
LINC01088-205ENST00000509088 KRTAP19-3Q7Z4W3 81 aa1.24□□□□□ -2.21
LINC01088-205ENST00000509088 SPRR2EP22531 72 aa1.23□□□□□ -2.21
LINC01088-205ENST00000509088 SPRR2DP22532 72 aa1.23□□□□□ -2.21
LINC01088-205ENST00000509088 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
LINC01088-205ENST00000509088 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
LINC01088-205ENST00000509088 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
LINC01088-205ENST00000509088 KMT2DO14686 5537 aa1.16□□□□□ -2.22
LINC01088-205ENST00000509088 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
LINC01088-205ENST00000509088 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
LINC01088-205ENST00000509088 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
LINC01088-205ENST00000509088 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
LINC01088-205ENST00000509088 USH2AO75445 5202 aa1.1□□□□□ -2.23
LINC01088-205ENST00000509088 KRTAP19-6Q3LI70 58 aa1.09□□□□□ -2.23
LINC01088-205ENST00000509088 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
LINC01088-205ENST00000509088 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
LINC01088-205ENST00000509088 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
LINC01088-205ENST00000509088 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
LINC01088-205ENST00000509088 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
LINC01088-205ENST00000509088 MT4P47944 62 aa0.81□□□□□ -2.28
LINC01088-205ENST00000509088 KRTAP20-2Q3LI61 65 aa0.72□□□□□ -2.29
LINC01088-205ENST00000509088 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms