RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 KRTAP19-6Q3LI70 58 aa1.63□□□□□ -2.15
APC-208ENST00000508624 MT1MQ8N339 61 aa1.63□□□□□ -2.15
APC-208ENST00000508624 SPRR2EP22531 72 aa1.63□□□□□ -2.15
APC-208ENST00000508624 SPRR2BP35325 72 aa1.63□□□□□ -2.15
APC-208ENST00000508624 SPRR2AP35326 72 aa1.63□□□□□ -2.15
APC-208ENST00000508624 USH2AO75445 5202 aa1.62□□□□□ -2.15
APC-208ENST00000508624 SSPOA2VEC9 5147 aa1.61□□□□□ -2.15
APC-208ENST00000508624 KRTAP19-7Q3SYF9 63 aa1.61□□□□□ -2.15
APC-208ENST00000508624 LPAP08519 4548 aa1.59□□□□□ -2.15
APC-208ENST00000508624 MT1AP04731 61 aa1.59□□□□□ -2.15
APC-208ENST00000508624 SPRR2DP22532 72 aa1.59□□□□□ -2.16
APC-208ENST00000508624 MT3P25713 68 aa1.58□□□□□ -2.16
APC-208ENST00000508624 KRTAP9-2Q9BYQ4 174 aa1.58□□□□□ -2.16
APC-208ENST00000508624 KRTAP4-7Q9BYR0 210 aa1.58□□□□□ -2.16
APC-208ENST00000508624 PRM1P04553 51 aa1.55□□□□□ -2.16
APC-208ENST00000508624 LCE2AQ5TA79 106 aaPredicted RBP1.54□□□□□ -2.16
APC-208ENST00000508624 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
APC-208ENST00000508624 LCE1AQ5T7P2 110 aa1.49□□□□□ -2.17
APC-208ENST00000508624 LOC100996750A0A140TA64 210 aa1.49□□□□□ -2.17
APC-208ENST00000508624 KRTAP9-7A8MTY7 169 aa1.49□□□□□ -2.17
APC-208ENST00000508624 MUC2Q02817 5179 aa1.48□□□□□ -2.17
APC-208ENST00000508624 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
APC-208ENST00000508624 LCE5AQ5TCM9 118 aa1.46□□□□□ -2.18
APC-208ENST00000508624 KRTAP4-3Q9BYR4 195 aa1.46□□□□□ -2.18
APC-208ENST00000508624 KRTAP9-4Q9BYQ2 154 aa1.42□□□□□ -2.18
APC-208ENST00000508624 KRTAP20-1Q3LI63 56 aa1.42□□□□□ -2.18
APC-208ENST00000508624 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.19
APC-208ENST00000508624 KRTAP4-6Q9BYQ5 205 aa1.4□□□□□ -2.19
APC-208ENST00000508624 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
APC-208ENST00000508624 KMT2DO14686 5537 aa1.4□□□□□ -2.19
APC-208ENST00000508624 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
APC-208ENST00000508624 KRTAP4-9Q9BYQ8 210 aa1.37□□□□□ -2.19
APC-208ENST00000508624 LCE4AQ5TA78 99 aa1.36□□□□□ -2.19
APC-208ENST00000508624 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.35□□□□□ -2.19
APC-208ENST00000508624 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
APC-208ENST00000508624 LCE1DQ5T752 114 aa1.33□□□□□ -2.2
APC-208ENST00000508624 MT4P47944 62 aa1.32□□□□□ -2.2
APC-208ENST00000508624 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
APC-208ENST00000508624 KRTAP2-2Q9BYT5 123 aa1.31□□□□□ -2.2
APC-208ENST00000508624 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
APC-208ENST00000508624 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
APC-208ENST00000508624 KRTAP5-9P26371 169 aa1.26□□□□□ -2.21
APC-208ENST00000508624 KRTAP9-9Q9BYP9 154 aa1.24□□□□□ -2.21
APC-208ENST00000508624 OBSCNQ5VST9 7968 aa1.23□□□□□ -2.21
APC-208ENST00000508624 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
APC-208ENST00000508624 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
APC-208ENST00000508624 SYNE2Q8WXH0 6885 aaKnown RBP1.19□□□□□ -2.22
APC-208ENST00000508624 KRTAP4-2Q9BYR5 136 aa1.18□□□□□ -2.22
APC-208ENST00000508624 HMCN1Q96RW7 5635 aa1.18□□□□□ -2.22
APC-208ENST00000508624 KRTAP5-5Q701N2 237 aaPredicted RBP1.18□□□□□ -2.22
APC-208ENST00000508624 KRTAP5-3Q6L8H2 238 aa1.18□□□□□ -2.22
APC-208ENST00000508624 MACF1Q9UPN3 7388 aaKnown RBP1.15□□□□□ -2.23
APC-208ENST00000508624 FSIP2Q5CZC0 6907 aa1.15□□□□□ -2.23
APC-208ENST00000508624 KRTAP4-12Q9BQ66 201 aa1.14□□□□□ -2.23
APC-208ENST00000508624 LCE1EQ5T753 118 aa1.13□□□□□ -2.23
APC-208ENST00000508624 KRTAP20-2Q3LI61 65 aa1.12□□□□□ -2.23
APC-208ENST00000508624 KRTAP5-4Q6L8H1 288 aa1.1□□□□□ -2.23
APC-208ENST00000508624 KRTAP4-11Q9BYQ6 195 aa1.1□□□□□ -2.23
APC-208ENST00000508624 NEBP20929 6669 aa1.09□□□□□ -2.23
APC-208ENST00000508624 LCE1CQ5T751 118 aa1.06□□□□□ -2.24
APC-208ENST00000508624 LCE1FQ5T754 118 aa1.06□□□□□ -2.24
APC-208ENST00000508624 DSTQ03001 7570 aaKnown RBP1.03□□□□□ -2.24
APC-208ENST00000508624 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
APC-208ENST00000508624 KRTAP5-2Q701N4 177 aa0.98□□□□□ -2.25
APC-208ENST00000508624 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
APC-208ENST00000508624 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
APC-208ENST00000508624 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.93□□□□□ -2.26
APC-208ENST00000508624 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
APC-208ENST00000508624 KRTAP5-1Q6L8H4 278 aa0.92□□□□□ -2.26
APC-208ENST00000508624 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
APC-208ENST00000508624 MUC19Q7Z5P9 8384 aa0.88□□□□□ -2.27
APC-208ENST00000508624 KRTAP4-4Q9BYR3 166 aa0.87□□□□□ -2.27
APC-208ENST00000508624 KRTAP5-8O75690 187 aa0.86□□□□□ -2.27
APC-208ENST00000508624 KRTAP5-11Q6L8G4 156 aa0.84□□□□□ -2.27
APC-208ENST00000508624 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
APC-208ENST00000508624 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
APC-208ENST00000508624 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
APC-208ENST00000508624 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 458.8 ms