RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
CCDC30-212ENST00000507855 KRTAP5-7Q6L8G8 165 aa1.26□□□□□ -2.21
CCDC30-212ENST00000507855 FAT3Q8TDW7 4589 aa1.26□□□□□ -2.21
CCDC30-212ENST00000507855 RPS29P62273 56 aaKnown RBP1.25□□□□□ -2.21
CCDC30-212ENST00000507855 KIAA1109Q2LD37 5005 aa1.25□□□□□ -2.21
CCDC30-212ENST00000507855 TNXBP22105 4242 aa1.24□□□□□ -2.21
CCDC30-212ENST00000507855 MT1HL1P0DM35 61 aa1.21□□□□□ -2.22
CCDC30-212ENST00000507855 C9orf92A6NGG3 77 aa1.21□□□□□ -2.22
CCDC30-212ENST00000507855 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
CCDC30-212ENST00000507855 KRTAP12-4P60329 112 aa1.2□□□□□ -2.22
CCDC30-212ENST00000507855 PCLOQ9Y6V0 5065 aa1.2□□□□□ -2.22
CCDC30-212ENST00000507855 LRP1Q07954 4544 aaKnown RBP1.2□□□□□ -2.22
CCDC30-212ENST00000507855 MUC17Q685J3 4493 aa1.18□□□□□ -2.22
CCDC30-212ENST00000507855 TNP1P09430 55 aa1.18□□□□□ -2.22
CCDC30-212ENST00000507855 SMR3BP02814 79 aaPredicted RBP1.17□□□□□ -2.22
CCDC30-212ENST00000507855 HMCN2Q8NDA2 5059 aa1.16□□□□□ -2.22
CCDC30-212ENST00000507855 HERC1Q15751 4861 aa1.16□□□□□ -2.22
CCDC30-212ENST00000507855 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
CCDC30-212ENST00000507855 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
CCDC30-212ENST00000507855 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
CCDC30-212ENST00000507855 LRP2P98164 4655 aa1.1□□□□□ -2.23
CCDC30-212ENST00000507855 KRTAP19-2Q3LHN2 52 aa1.09□□□□□ -2.24
CCDC30-212ENST00000507855 KRTAP8-1Q8IUC2 63 aa1.09□□□□□ -2.24
CCDC30-212ENST00000507855 LPAP08519 4548 aa1.07□□□□□ -2.24
CCDC30-212ENST00000507855 FLGP20930 4061 aaPredicted RBP1.07□□□□□ -2.24
CCDC30-212ENST00000507855 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
CCDC30-212ENST00000507855 M0R2T5 61 aa1.05□□□□□ -2.24
CCDC30-212ENST00000507855 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
CCDC30-212ENST00000507855 KRTAP4-1Q9BYQ7 146 aa1.05□□□□□ -2.24
CCDC30-212ENST00000507855 RNF213Q63HN8 5207 aa1.04□□□□□ -2.24
CCDC30-212ENST00000507855 UBR4Q5T4S7 5183 aa1.03□□□□□ -2.24
CCDC30-212ENST00000507855 FAT4Q6V0I7 4981 aa1.03□□□□□ -2.24
CCDC30-212ENST00000507855 PRM1P04553 51 aa1.02□□□□□ -2.25
CCDC30-212ENST00000507855 MT1HP80294 61 aa1.01□□□□□ -2.25
CCDC30-212ENST00000507855 MUC2Q02817 5179 aa0.98□□□□□ -2.25
CCDC30-212ENST00000507855 KRTAP19-5Q3LI72 72 aa0.97□□□□□ -2.25
CCDC30-212ENST00000507855 CRCT1Q9UGL9 99 aa0.97□□□□□ -2.25
CCDC30-212ENST00000507855 MT2AP02795 61 aa0.96□□□□□ -2.26
CCDC30-212ENST00000507855 SPRR2GQ9BYE4 73 aa0.96□□□□□ -2.26
CCDC30-212ENST00000507855 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
CCDC30-212ENST00000507855 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
CCDC30-212ENST00000507855 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
CCDC30-212ENST00000507855 MT1FP04733 61 aa0.95□□□□□ -2.26
CCDC30-212ENST00000507855 KRTAP19-6Q3LI70 58 aa0.91□□□□□ -2.26
CCDC30-212ENST00000507855 MT1BP07438 61 aa0.91□□□□□ -2.26
CCDC30-212ENST00000507855 SSPOA2VEC9 5147 aa0.89□□□□□ -2.27
CCDC30-212ENST00000507855 USH2AO75445 5202 aa0.88□□□□□ -2.27
CCDC30-212ENST00000507855 FCGBPQ9Y6R7 5405 aaPredicted RBP0.87□□□□□ -2.27
CCDC30-212ENST00000507855 SYNE2Q8WXH0 6885 aaKnown RBP0.87□□□□□ -2.27
CCDC30-212ENST00000507855 MT1XP80297 61 aa0.87□□□□□ -2.27
CCDC30-212ENST00000507855 KRTAP6-2Q3LI66 62 aa0.86□□□□□ -2.27
CCDC30-212ENST00000507855 NEBP20929 6669 aa0.85□□□□□ -2.27
CCDC30-212ENST00000507855 MT1AP04731 61 aa0.83□□□□□ -2.28
CCDC30-212ENST00000507855 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
CCDC30-212ENST00000507855 KRTAP19-7Q3SYF9 63 aa0.78□□□□□ -2.28
CCDC30-212ENST00000507855 MT1EP04732 61 aa0.77□□□□□ -2.29
CCDC30-212ENST00000507855 MT1GP13640 62 aa0.74□□□□□ -2.29
CCDC30-212ENST00000507855 MT1LQ93083 61 aa0.74□□□□□ -2.29
CCDC30-212ENST00000507855 SPRR2DP22532 72 aa0.74□□□□□ -2.29
CCDC30-212ENST00000507855 KMT2DO14686 5537 aa0.73□□□□□ -2.29
CCDC30-212ENST00000507855 SPRR2FQ96RM1 72 aa0.73□□□□□ -2.29
CCDC30-212ENST00000507855 FSIP2Q5CZC0 6907 aa0.73□□□□□ -2.29
CCDC30-212ENST00000507855 MT1MQ8N339 61 aa0.72□□□□□ -2.29
CCDC30-212ENST00000507855 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
CCDC30-212ENST00000507855 MUC12Q9UKN1 5478 aa0.71□□□□□ -2.3
CCDC30-212ENST00000507855 SPRR2EP22531 72 aa0.7□□□□□ -2.3
CCDC30-212ENST00000507855 SPRR2BP35325 72 aa0.7□□□□□ -2.3
CCDC30-212ENST00000507855 SPRR2AP35326 72 aa0.7□□□□□ -2.3
CCDC30-212ENST00000507855 MDN1Q9NU22 5596 aa0.7□□□□□ -2.3
CCDC30-212ENST00000507855 KRTAP20-1Q3LI63 56 aa0.68□□□□□ -2.3
CCDC30-212ENST00000507855 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
CCDC30-212ENST00000507855 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
CCDC30-212ENST00000507855 KRTAP20-2Q3LI61 65 aa0.61□□□□□ -2.31
CCDC30-212ENST00000507855 KRTAP5-10Q6L8G5 202 aa0.57□□□□□ -2.32
CCDC30-212ENST00000507855 MT4P47944 62 aa0.55□□□□□ -2.32
CCDC30-212ENST00000507855 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
CCDC30-212ENST00000507855 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 75.8 ms