RNA–Protein interactions for RNA: ENST00000507846.5

PCDH18-203, Transcript of protocadherin 18, humanhuman

TSL 1 (best) BASIC

Gene PCDH18, Length 4,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-203ENST00000507846 KRTAP4-8A0A0G2JLE6 195 aa2.24□□□□□ -2.05
PCDH18-203ENST00000507846 KRTAP4-8Q9BYQ9 185 aa2.24□□□□□ -2.05
PCDH18-203ENST00000507846 SPRR2DP22532 72 aa2.24□□□□□ -2.05
PCDH18-203ENST00000507846 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.23□□□□□ -2.05
PCDH18-203ENST00000507846 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.06
PCDH18-203ENST00000507846 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
PCDH18-203ENST00000507846 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
PCDH18-203ENST00000507846 MT1EP04732 61 aa2.19□□□□□ -2.06
PCDH18-203ENST00000507846 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
PCDH18-203ENST00000507846 LOC100996750A0A140TA64 210 aa2.17□□□□□ -2.06
PCDH18-203ENST00000507846 KRTAP4-6Q9BYQ5 205 aa2.17□□□□□ -2.06
PCDH18-203ENST00000507846 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
PCDH18-203ENST00000507846 FLGP20930 4061 aaPredicted RBP2.15□□□□□ -2.07
PCDH18-203ENST00000507846 KRTAP4-7Q9BYR0 210 aa2.14□□□□□ -2.07
PCDH18-203ENST00000507846 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
PCDH18-203ENST00000507846 MT1MQ8N339 61 aa2.11□□□□□ -2.07
PCDH18-203ENST00000507846 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
PCDH18-203ENST00000507846 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
PCDH18-203ENST00000507846 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
PCDH18-203ENST00000507846 MT3P25713 68 aa2.08□□□□□ -2.08
PCDH18-203ENST00000507846 PRM1P04553 51 aa2.07□□□□□ -2.08
PCDH18-203ENST00000507846 KMT2DO14686 5537 aa2.06□□□□□ -2.08
PCDH18-203ENST00000507846 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
PCDH18-203ENST00000507846 USH2AO75445 5202 aa2.03□□□□□ -2.08
PCDH18-203ENST00000507846 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
PCDH18-203ENST00000507846 MT1AP04731 61 aa2.01□□□□□ -2.09
PCDH18-203ENST00000507846 MT4P47944 62 aa2□□□□□ -2.09
PCDH18-203ENST00000507846 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
PCDH18-203ENST00000507846 KRTAP2-2Q9BYT5 123 aa1.98□□□□□ -2.09
PCDH18-203ENST00000507846 NEBP20929 6669 aa1.97□□□□□ -2.09
PCDH18-203ENST00000507846 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
PCDH18-203ENST00000507846 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
PCDH18-203ENST00000507846 LCE1AQ5T7P2 110 aa1.94□□□□□ -2.1
PCDH18-203ENST00000507846 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
PCDH18-203ENST00000507846 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
PCDH18-203ENST00000507846 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
PCDH18-203ENST00000507846 KRTAP4-9Q9BYQ8 210 aa1.89□□□□□ -2.11
PCDH18-203ENST00000507846 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
PCDH18-203ENST00000507846 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
PCDH18-203ENST00000507846 LCE1DQ5T752 114 aa1.86□□□□□ -2.11
PCDH18-203ENST00000507846 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
PCDH18-203ENST00000507846 KRTAP9-9Q9BYP9 154 aa1.85□□□□□ -2.11
PCDH18-203ENST00000507846 KRTAP9-4Q9BYQ2 154 aa1.85□□□□□ -2.11
PCDH18-203ENST00000507846 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.12
PCDH18-203ENST00000507846 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.12
PCDH18-203ENST00000507846 LCE5AQ5TCM9 118 aa1.83□□□□□ -2.12
PCDH18-203ENST00000507846 KRTAP6-1Q3LI64 71 aa1.83□□□□□ -2.12
PCDH18-203ENST00000507846 KRTAP5-9P26371 169 aa1.83□□□□□ -2.12
PCDH18-203ENST00000507846 LCE4AQ5TA78 99 aa1.81□□□□□ -2.12
PCDH18-203ENST00000507846 MUC12Q9UKN1 5478 aa1.78□□□□□ -2.12
PCDH18-203ENST00000507846 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
PCDH18-203ENST00000507846 KRTAP5-2Q701N4 177 aa1.7□□□□□ -2.14
PCDH18-203ENST00000507846 KRTAP5-3Q6L8H2 238 aa1.68□□□□□ -2.14
PCDH18-203ENST00000507846 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
PCDH18-203ENST00000507846 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
PCDH18-203ENST00000507846 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
PCDH18-203ENST00000507846 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
PCDH18-203ENST00000507846 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.16
PCDH18-203ENST00000507846 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
PCDH18-203ENST00000507846 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
PCDH18-203ENST00000507846 KRTAP4-11Q9BYQ6 195 aa1.55□□□□□ -2.16
PCDH18-203ENST00000507846 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
PCDH18-203ENST00000507846 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
PCDH18-203ENST00000507846 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
PCDH18-203ENST00000507846 KRTAP5-5Q701N2 237 aaPredicted RBP1.47□□□□□ -2.17
PCDH18-203ENST00000507846 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
PCDH18-203ENST00000507846 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
PCDH18-203ENST00000507846 KRTAP5-8O75690 187 aa1.32□□□□□ -2.2
PCDH18-203ENST00000507846 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
PCDH18-203ENST00000507846 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
PCDH18-203ENST00000507846 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
PCDH18-203ENST00000507846 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
PCDH18-203ENST00000507846 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
PCDH18-203ENST00000507846 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
PCDH18-203ENST00000507846 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
PCDH18-203ENST00000507846 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
PCDH18-203ENST00000507846 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 146 ms