RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 EPPK1P58107 5090 aaKnown RBP1.75□□□□□ -2.13
CHD1-204ENST00000505982 FAT2Q9NYQ8 4349 aa1.75□□□□□ -2.13
CHD1-204ENST00000505982 TNXBP22105 4242 aa1.74□□□□□ -2.13
CHD1-204ENST00000505982 APOBP04114 4563 aaKnown RBP1.73□□□□□ -2.13
CHD1-204ENST00000505982 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
CHD1-204ENST00000505982 RYR1P21817 5038 aa1.72□□□□□ -2.13
CHD1-204ENST00000505982 LRP1Q07954 4544 aaKnown RBP1.71□□□□□ -2.14
CHD1-204ENST00000505982 KIAA1109Q2LD37 5005 aa1.69□□□□□ -2.14
CHD1-204ENST00000505982 DYNC1H1Q14204 4646 aaKnown RBP1.68□□□□□ -2.14
CHD1-204ENST00000505982 RYR2Q92736 4967 aa1.68□□□□□ -2.14
CHD1-204ENST00000505982 FAT3Q8TDW7 4589 aa1.67□□□□□ -2.14
CHD1-204ENST00000505982 FAT1Q14517 4588 aa1.67□□□□□ -2.14
CHD1-204ENST00000505982 KRTAP19-2Q3LHN2 52 aa1.66□□□□□ -2.14
CHD1-204ENST00000505982 HSPG2P98160 4391 aa1.66□□□□□ -2.14
CHD1-204ENST00000505982 HERC2O95714 4834 aa1.65□□□□□ -2.15
CHD1-204ENST00000505982 SPRR2GQ9BYE4 73 aa1.64□□□□□ -2.15
CHD1-204ENST00000505982 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
CHD1-204ENST00000505982 M0R2T5 61 aa1.62□□□□□ -2.15
CHD1-204ENST00000505982 MYCBP2O75592 4640 aa1.62□□□□□ -2.15
CHD1-204ENST00000505982 MUC2Q02817 5179 aa1.57□□□□□ -2.16
CHD1-204ENST00000505982 FLGP20930 4061 aaPredicted RBP1.55□□□□□ -2.16
CHD1-204ENST00000505982 KRTAP19-8Q3LI54 63 aa1.55□□□□□ -2.16
CHD1-204ENST00000505982 LRP2P98164 4655 aa1.54□□□□□ -2.16
CHD1-204ENST00000505982 ABCA13Q86UQ4 5058 aa1.54□□□□□ -2.16
CHD1-204ENST00000505982 HERC1Q15751 4861 aa1.54□□□□□ -2.16
CHD1-204ENST00000505982 MT2AP02795 61 aa1.53□□□□□ -2.16
CHD1-204ENST00000505982 MT1FP04733 61 aa1.53□□□□□ -2.16
CHD1-204ENST00000505982 MT1XP80297 61 aa1.53□□□□□ -2.16
CHD1-204ENST00000505982 MUC17Q685J3 4493 aa1.52□□□□□ -2.17
CHD1-204ENST00000505982 MT1HP80294 61 aa1.51□□□□□ -2.17
CHD1-204ENST00000505982 LPAP08519 4548 aa1.51□□□□□ -2.17
CHD1-204ENST00000505982 MT1BP07438 61 aa1.5□□□□□ -2.17
CHD1-204ENST00000505982 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
CHD1-204ENST00000505982 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
CHD1-204ENST00000505982 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
CHD1-204ENST00000505982 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
CHD1-204ENST00000505982 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
CHD1-204ENST00000505982 FAT4Q6V0I7 4981 aa1.41□□□□□ -2.18
CHD1-204ENST00000505982 RNF213Q63HN8 5207 aa1.39□□□□□ -2.19
CHD1-204ENST00000505982 HMCN2Q8NDA2 5059 aa1.38□□□□□ -2.19
CHD1-204ENST00000505982 KRTAP20-1Q3LI63 56 aa1.35□□□□□ -2.19
CHD1-204ENST00000505982 MT1LQ93083 61 aa1.35□□□□□ -2.19
CHD1-204ENST00000505982 KRTAP19-7Q3SYF9 63 aa1.34□□□□□ -2.19
CHD1-204ENST00000505982 MT1EP04732 61 aa1.32□□□□□ -2.2
CHD1-204ENST00000505982 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
CHD1-204ENST00000505982 NEBP20929 6669 aa1.29□□□□□ -2.2
CHD1-204ENST00000505982 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
CHD1-204ENST00000505982 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
CHD1-204ENST00000505982 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
CHD1-204ENST00000505982 MT1GP13640 62 aa1.26□□□□□ -2.21
CHD1-204ENST00000505982 MT1MQ8N339 61 aa1.24□□□□□ -2.21
CHD1-204ENST00000505982 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
CHD1-204ENST00000505982 KRTAP19-3Q7Z4W3 81 aa1.22□□□□□ -2.21
CHD1-204ENST00000505982 MT1AP04731 61 aa1.21□□□□□ -2.22
CHD1-204ENST00000505982 PRM1P04553 51 aa1.2□□□□□ -2.22
CHD1-204ENST00000505982 KRTAP19-6Q3LI70 58 aa1.17□□□□□ -2.22
CHD1-204ENST00000505982 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
CHD1-204ENST00000505982 KRTAP6-1Q3LI64 71 aa1.13□□□□□ -2.23
CHD1-204ENST00000505982 SPRR2FQ96RM1 72 aa1.13□□□□□ -2.23
CHD1-204ENST00000505982 KMT2DO14686 5537 aa1.13□□□□□ -2.23
CHD1-204ENST00000505982 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
CHD1-204ENST00000505982 USH2AO75445 5202 aa1.11□□□□□ -2.23
CHD1-204ENST00000505982 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
CHD1-204ENST00000505982 MUC12Q9UKN1 5478 aa1.07□□□□□ -2.24
CHD1-204ENST00000505982 SPRR2AP35326 72 aa1.06□□□□□ -2.24
CHD1-204ENST00000505982 SPRR2EP22531 72 aa1.03□□□□□ -2.24
CHD1-204ENST00000505982 SPRR2BP35325 72 aa1.01□□□□□ -2.25
CHD1-204ENST00000505982 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
CHD1-204ENST00000505982 SPRR2DP22532 72 aa0.98□□□□□ -2.25
CHD1-204ENST00000505982 DSTQ03001 7570 aaKnown RBP0.97□□□□□ -2.25
CHD1-204ENST00000505982 MDN1Q9NU22 5596 aa0.94□□□□□ -2.26
CHD1-204ENST00000505982 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
CHD1-204ENST00000505982 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
CHD1-204ENST00000505982 MUC5ACP98088 5654 aa0.88□□□□□ -2.27
CHD1-204ENST00000505982 MT4P47944 62 aa0.85□□□□□ -2.27
CHD1-204ENST00000505982 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
CHD1-204ENST00000505982 KRTAP20-2Q3LI61 65 aa0.81□□□□□ -2.28
CHD1-204ENST00000505982 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 93.5 ms