RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.13
MATR3-211ENST00000505625 KRTAP4-7Q9BYR0 210 aa1.76□□□□□ -2.13
MATR3-211ENST00000505625 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
MATR3-211ENST00000505625 KIAA1109Q2LD37 5005 aa1.76□□□□□ -2.13
MATR3-211ENST00000505625 LRP2P98164 4655 aa1.7□□□□□ -2.14
MATR3-211ENST00000505625 BIRC6Q9NR09 4857 aa1.7□□□□□ -2.14
MATR3-211ENST00000505625 KRTAP9-8Q9BYQ0 159 aa1.7□□□□□ -2.14
MATR3-211ENST00000505625 LOC100996750A0A140TA64 210 aa1.69□□□□□ -2.14
MATR3-211ENST00000505625 HERC1Q15751 4861 aa1.68□□□□□ -2.14
MATR3-211ENST00000505625 HMCN2Q8NDA2 5059 aa1.68□□□□□ -2.14
MATR3-211ENST00000505625 MT1XP80297 61 aa1.68□□□□□ -2.14
MATR3-211ENST00000505625 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
MATR3-211ENST00000505625 KRTAP19-3Q7Z4W3 81 aa1.67□□□□□ -2.14
MATR3-211ENST00000505625 KRTAP2-3P0C7H8 128 aa1.66□□□□□ -2.14
MATR3-211ENST00000505625 KRTAP2-4Q9BYR9 128 aa1.66□□□□□ -2.14
MATR3-211ENST00000505625 KRTAP4-3Q9BYR4 195 aa1.65□□□□□ -2.15
MATR3-211ENST00000505625 KRTAP9-3Q9BYQ3 159 aa1.65□□□□□ -2.15
MATR3-211ENST00000505625 SYNE2Q8WXH0 6885 aaKnown RBP1.64□□□□□ -2.15
MATR3-211ENST00000505625 MT3P25713 68 aa1.63□□□□□ -2.15
MATR3-211ENST00000505625 KRTAP19-8Q3LI54 63 aa1.63□□□□□ -2.15
MATR3-211ENST00000505625 MT1BP07438 61 aa1.62□□□□□ -2.15
MATR3-211ENST00000505625 PRM1P04553 51 aa1.62□□□□□ -2.15
MATR3-211ENST00000505625 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.6□□□□□ -2.15
MATR3-211ENST00000505625 LCE4AQ5TA78 99 aa1.59□□□□□ -2.15
MATR3-211ENST00000505625 KRTAP9-9Q9BYP9 154 aa1.59□□□□□ -2.15
MATR3-211ENST00000505625 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
MATR3-211ENST00000505625 KRTAP2-2Q9BYT5 123 aa1.55□□□□□ -2.16
MATR3-211ENST00000505625 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
MATR3-211ENST00000505625 MT1MQ8N339 61 aa1.54□□□□□ -2.16
MATR3-211ENST00000505625 KRTAP19-2Q3LHN2 52 aa1.54□□□□□ -2.16
MATR3-211ENST00000505625 MT1LQ93083 61 aa1.54□□□□□ -2.16
MATR3-211ENST00000505625 MT1EP04732 61 aa1.53□□□□□ -2.16
MATR3-211ENST00000505625 FSIP2Q5CZC0 6907 aa1.53□□□□□ -2.16
MATR3-211ENST00000505625 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
MATR3-211ENST00000505625 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
MATR3-211ENST00000505625 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
MATR3-211ENST00000505625 USH2AO75445 5202 aa1.45□□□□□ -2.18
MATR3-211ENST00000505625 KRTAP4-6Q9BYQ5 205 aa1.44□□□□□ -2.18
MATR3-211ENST00000505625 KRTAP19-7Q3SYF9 63 aa1.44□□□□□ -2.18
MATR3-211ENST00000505625 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
MATR3-211ENST00000505625 KRTAP9-4Q9BYQ2 154 aa1.42□□□□□ -2.18
MATR3-211ENST00000505625 KRTAP4-12Q9BQ66 201 aa1.39□□□□□ -2.19
MATR3-211ENST00000505625 KRTAP4-2Q9BYR5 136 aa1.39□□□□□ -2.19
MATR3-211ENST00000505625 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
MATR3-211ENST00000505625 KMT2DO14686 5537 aa1.37□□□□□ -2.19
MATR3-211ENST00000505625 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
MATR3-211ENST00000505625 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
MATR3-211ENST00000505625 MT1AP04731 61 aa1.35□□□□□ -2.19
MATR3-211ENST00000505625 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
MATR3-211ENST00000505625 MDN1Q9NU22 5596 aa1.28□□□□□ -2.2
MATR3-211ENST00000505625 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
MATR3-211ENST00000505625 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
MATR3-211ENST00000505625 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
MATR3-211ENST00000505625 KRTAP4-11Q9BYQ6 195 aa1.25□□□□□ -2.21
MATR3-211ENST00000505625 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
MATR3-211ENST00000505625 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
MATR3-211ENST00000505625 KRTAP9-6A8MVA2 160 aa1.2□□□□□ -2.22
MATR3-211ENST00000505625 NEBP20929 6669 aa1.19□□□□□ -2.22
MATR3-211ENST00000505625 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
MATR3-211ENST00000505625 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
MATR3-211ENST00000505625 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
MATR3-211ENST00000505625 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
MATR3-211ENST00000505625 KRTAP5-9P26371 169 aa1.1□□□□□ -2.23
MATR3-211ENST00000505625 KRTAP5-5Q701N2 237 aaPredicted RBP1.1□□□□□ -2.23
MATR3-211ENST00000505625 DSTQ03001 7570 aaKnown RBP1.06□□□□□ -2.24
MATR3-211ENST00000505625 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
MATR3-211ENST00000505625 KRTAP5-4Q6L8H1 288 aa1.04□□□□□ -2.24
MATR3-211ENST00000505625 OBSCNQ5VST9 7968 aa1.03□□□□□ -2.24
MATR3-211ENST00000505625 KRTAP5-3Q6L8H2 238 aa1.03□□□□□ -2.24
MATR3-211ENST00000505625 MUC19Q7Z5P9 8384 aa0.92□□□□□ -2.26
MATR3-211ENST00000505625 KRTAP5-8O75690 187 aa0.91□□□□□ -2.26
MATR3-211ENST00000505625 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
MATR3-211ENST00000505625 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
MATR3-211ENST00000505625 KRTAP5-11Q6L8G4 156 aa0.73□□□□□ -2.29
MATR3-211ENST00000505625 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
MATR3-211ENST00000505625 KRTAP5-1Q6L8H4 278 aa0.71□□□□□ -2.3
MATR3-211ENST00000505625 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
MATR3-211ENST00000505625 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms