RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 RNF213Q63HN8 5207 aa2.19□□□□□ -2.06
DEPDC1B-203ENST00000505017 M0R2T5 61 aa2.18□□□□□ -2.06
DEPDC1B-203ENST00000505017 MUC2Q02817 5179 aa2.18□□□□□ -2.06
DEPDC1B-203ENST00000505017 FAT4Q6V0I7 4981 aa2.17□□□□□ -2.06
DEPDC1B-203ENST00000505017 K7ERS5 55 aa2.17□□□□□ -2.06
DEPDC1B-203ENST00000505017 R4GN34 69 aa2.17□□□□□ -2.06
DEPDC1B-203ENST00000505017 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
DEPDC1B-203ENST00000505017 KRTAP13-4Q3LI77 160 aa2.16□□□□□ -2.06
DEPDC1B-203ENST00000505017 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
DEPDC1B-203ENST00000505017 A6NN06 94 aa2.15□□□□□ -2.07
DEPDC1B-203ENST00000505017 PMAIP1Q13794 54 aa2.13□□□□□ -2.07
DEPDC1B-203ENST00000505017 A0A0D9SG42 100 aa2.12□□□□□ -2.07
DEPDC1B-203ENST00000505017 SPRR2GQ9BYE4 73 aa2.12□□□□□ -2.07
DEPDC1B-203ENST00000505017 MT2AP02795 61 aa2.11□□□□□ -2.07
DEPDC1B-203ENST00000505017 KRTAP12-1P59990 96 aa2.11□□□□□ -2.07
DEPDC1B-203ENST00000505017 MT1FP04733 61 aa2.09□□□□□ -2.07
DEPDC1B-203ENST00000505017 LINC01554Q52M75 96 aa2.09□□□□□ -2.07
DEPDC1B-203ENST00000505017 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
DEPDC1B-203ENST00000505017 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
DEPDC1B-203ENST00000505017 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
DEPDC1B-203ENST00000505017 CRCT1Q9UGL9 99 aa2.07□□□□□ -2.08
DEPDC1B-203ENST00000505017 ROMO1P60602 79 aa2.06□□□□□ -2.08
DEPDC1B-203ENST00000505017 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
DEPDC1B-203ENST00000505017 PLAC4Q8WY50 150 aa2.05□□□□□ -2.08
DEPDC1B-203ENST00000505017 MT1BP07438 61 aa2□□□□□ -2.09
DEPDC1B-203ENST00000505017 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
DEPDC1B-203ENST00000505017 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
DEPDC1B-203ENST00000505017 PRO2289Q9P1D8 64 aa1.97□□□□□ -2.09
DEPDC1B-203ENST00000505017 TNP1P09430 55 aa1.96□□□□□ -2.1
DEPDC1B-203ENST00000505017 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
DEPDC1B-203ENST00000505017 MT1XP80297 61 aa1.94□□□□□ -2.1
DEPDC1B-203ENST00000505017 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
DEPDC1B-203ENST00000505017 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
DEPDC1B-203ENST00000505017 USH2AO75445 5202 aa1.86□□□□□ -2.11
DEPDC1B-203ENST00000505017 KRTAP8-1Q8IUC2 63 aa1.84□□□□□ -2.11
DEPDC1B-203ENST00000505017 SSPOA2VEC9 5147 aa1.84□□□□□ -2.12
DEPDC1B-203ENST00000505017 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
DEPDC1B-203ENST00000505017 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
DEPDC1B-203ENST00000505017 MT1EP04732 61 aa1.7□□□□□ -2.14
DEPDC1B-203ENST00000505017 FSIP2Q5CZC0 6907 aa1.69□□□□□ -2.14
DEPDC1B-203ENST00000505017 MT1LQ93083 61 aa1.67□□□□□ -2.14
DEPDC1B-203ENST00000505017 KMT2DO14686 5537 aa1.67□□□□□ -2.14
DEPDC1B-203ENST00000505017 LUZP6Q538Z0 58 aa1.66□□□□□ -2.14
DEPDC1B-203ENST00000505017 MT1GP13640 62 aa1.65□□□□□ -2.15
DEPDC1B-203ENST00000505017 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
DEPDC1B-203ENST00000505017 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
DEPDC1B-203ENST00000505017 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
DEPDC1B-203ENST00000505017 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
DEPDC1B-203ENST00000505017 MT1MQ8N339 61 aa1.6□□□□□ -2.15
DEPDC1B-203ENST00000505017 SPRR2EP22531 72 aa1.57□□□□□ -2.16
DEPDC1B-203ENST00000505017 SPRR2BP35325 72 aa1.57□□□□□ -2.16
DEPDC1B-203ENST00000505017 SPRR2AP35326 72 aa1.57□□□□□ -2.16
DEPDC1B-203ENST00000505017 MUC12Q9UKN1 5478 aa1.57□□□□□ -2.16
DEPDC1B-203ENST00000505017 SYNE2Q8WXH0 6885 aaKnown RBP1.53□□□□□ -2.16
DEPDC1B-203ENST00000505017 SPRR2DP22532 72 aa1.51□□□□□ -2.17
DEPDC1B-203ENST00000505017 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
DEPDC1B-203ENST00000505017 NEBP20929 6669 aa1.5□□□□□ -2.17
DEPDC1B-203ENST00000505017 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
DEPDC1B-203ENST00000505017 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
DEPDC1B-203ENST00000505017 KRTAP2-1Q9BYU5 128 aa1.47□□□□□ -2.17
DEPDC1B-203ENST00000505017 MT1AP04731 61 aa1.44□□□□□ -2.18
DEPDC1B-203ENST00000505017 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
DEPDC1B-203ENST00000505017 KRTAP20-1Q3LI63 56 aa1.38□□□□□ -2.19
DEPDC1B-203ENST00000505017 DSTQ03001 7570 aaKnown RBP1.38□□□□□ -2.19
DEPDC1B-203ENST00000505017 INE1O15225 51 aa1.37□□□□□ -2.19
DEPDC1B-203ENST00000505017 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
DEPDC1B-203ENST00000505017 SYNE1Q8NF91 8797 aaKnown RBP1.33□□□□□ -2.2
DEPDC1B-203ENST00000505017 MT4P47944 62 aa1.28□□□□□ -2.2
DEPDC1B-203ENST00000505017 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
DEPDC1B-203ENST00000505017 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
DEPDC1B-203ENST00000505017 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
DEPDC1B-203ENST00000505017 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
DEPDC1B-203ENST00000505017 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
DEPDC1B-203ENST00000505017 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
DEPDC1B-203ENST00000505017 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
DEPDC1B-203ENST00000505017 PRM1P04553 51 aa1.05□□□□□ -2.24
DEPDC1B-203ENST00000505017 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
DEPDC1B-203ENST00000505017 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 68.8 ms