RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 KRTAP2-2Q9BYT5 123 aa2.05□□□□□ -2.08
CLCN3-204ENST00000504131 SPRR2EP22531 72 aa2.03□□□□□ -2.08
CLCN3-204ENST00000504131 SPRR2BP35325 72 aa2.03□□□□□ -2.08
CLCN3-204ENST00000504131 SPRR2AP35326 72 aa2.03□□□□□ -2.08
CLCN3-204ENST00000504131 KRTAP19-8Q3LI54 63 aa2.02□□□□□ -2.09
CLCN3-204ENST00000504131 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
CLCN3-204ENST00000504131 KRTAP4-9Q9BYQ8 210 aa2.01□□□□□ -2.09
CLCN3-204ENST00000504131 LCE1DQ5T752 114 aa2□□□□□ -2.09
CLCN3-204ENST00000504131 KRTAP19-1Q8IUB9 90 aa2□□□□□ -2.09
CLCN3-204ENST00000504131 SPRR2DP22532 72 aa1.99□□□□□ -2.09
CLCN3-204ENST00000504131 KRTAP9-3Q9BYQ3 159 aa1.95□□□□□ -2.1
CLCN3-204ENST00000504131 LCE3BQ5TA77 95 aa1.94□□□□□ -2.1
CLCN3-204ENST00000504131 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
CLCN3-204ENST00000504131 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
CLCN3-204ENST00000504131 RNF213Q63HN8 5207 aa1.93□□□□□ -2.1
CLCN3-204ENST00000504131 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
CLCN3-204ENST00000504131 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
CLCN3-204ENST00000504131 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
CLCN3-204ENST00000504131 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
CLCN3-204ENST00000504131 KRTAP9-7A8MTY7 169 aa1.92□□□□□ -2.1
CLCN3-204ENST00000504131 MT1XP80297 61 aa1.91□□□□□ -2.1
CLCN3-204ENST00000504131 MT1BP07438 61 aa1.88□□□□□ -2.11
CLCN3-204ENST00000504131 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
CLCN3-204ENST00000504131 LCE4AQ5TA78 99 aa1.88□□□□□ -2.11
CLCN3-204ENST00000504131 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
CLCN3-204ENST00000504131 MT1GP13640 62 aa1.87□□□□□ -2.11
CLCN3-204ENST00000504131 MUC2Q02817 5179 aa1.87□□□□□ -2.11
CLCN3-204ENST00000504131 FAT4Q6V0I7 4981 aa1.85□□□□□ -2.11
CLCN3-204ENST00000504131 KRTAP4-11Q9BYQ6 195 aa1.83□□□□□ -2.12
CLCN3-204ENST00000504131 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
CLCN3-204ENST00000504131 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
CLCN3-204ENST00000504131 KRTAP9-6A8MVA2 160 aa1.74□□□□□ -2.13
CLCN3-204ENST00000504131 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
CLCN3-204ENST00000504131 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
CLCN3-204ENST00000504131 MT1LQ93083 61 aa1.71□□□□□ -2.14
CLCN3-204ENST00000504131 USH2AO75445 5202 aa1.71□□□□□ -2.14
CLCN3-204ENST00000504131 MT1EP04732 61 aa1.7□□□□□ -2.14
CLCN3-204ENST00000504131 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
CLCN3-204ENST00000504131 MT4P47944 62 aa1.66□□□□□ -2.14
CLCN3-204ENST00000504131 MT1MQ8N339 61 aa1.65□□□□□ -2.14
CLCN3-204ENST00000504131 SYNE2Q8WXH0 6885 aaKnown RBP1.64□□□□□ -2.15
CLCN3-204ENST00000504131 MT1AP04731 61 aa1.63□□□□□ -2.15
CLCN3-204ENST00000504131 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
CLCN3-204ENST00000504131 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
CLCN3-204ENST00000504131 KRTAP5-9P26371 169 aa1.57□□□□□ -2.16
CLCN3-204ENST00000504131 NEBP20929 6669 aa1.55□□□□□ -2.16
CLCN3-204ENST00000504131 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
CLCN3-204ENST00000504131 OBSCNQ5VST9 7968 aa1.53□□□□□ -2.16
CLCN3-204ENST00000504131 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
CLCN3-204ENST00000504131 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
CLCN3-204ENST00000504131 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
CLCN3-204ENST00000504131 GPR98Q8WXG9 6306 aa1.48□□□□□ -2.17
CLCN3-204ENST00000504131 KMT2DO14686 5537 aa1.48□□□□□ -2.17
CLCN3-204ENST00000504131 KRTAP6-1Q3LI64 71 aa1.48□□□□□ -2.17
CLCN3-204ENST00000504131 KRTAP5-4Q6L8H1 288 aa1.48□□□□□ -2.17
CLCN3-204ENST00000504131 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
CLCN3-204ENST00000504131 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
CLCN3-204ENST00000504131 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
CLCN3-204ENST00000504131 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
CLCN3-204ENST00000504131 MUC12Q9UKN1 5478 aa1.37□□□□□ -2.19
CLCN3-204ENST00000504131 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
CLCN3-204ENST00000504131 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
CLCN3-204ENST00000504131 KRTAP4-4Q9BYR3 166 aa1.32□□□□□ -2.2
CLCN3-204ENST00000504131 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.2
CLCN3-204ENST00000504131 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
CLCN3-204ENST00000504131 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
CLCN3-204ENST00000504131 KRTAP5-1Q6L8H4 278 aa1.24□□□□□ -2.21
CLCN3-204ENST00000504131 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
CLCN3-204ENST00000504131 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
CLCN3-204ENST00000504131 KRTAP5-8O75690 187 aa1.21□□□□□ -2.22
CLCN3-204ENST00000504131 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
CLCN3-204ENST00000504131 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
CLCN3-204ENST00000504131 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
CLCN3-204ENST00000504131 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
CLCN3-204ENST00000504131 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
CLCN3-204ENST00000504131 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
CLCN3-204ENST00000504131 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 72.4 ms