RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 RYR2Q92736 4967 aa2.09□□□□□ -2.07
LINC01340-201ENST00000504012 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
LINC01340-201ENST00000504012 KRTAP9-6A8MVA2 160 aa2.06□□□□□ -2.08
LINC01340-201ENST00000504012 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
LINC01340-201ENST00000504012 RYR1P21817 5038 aa2.04□□□□□ -2.08
LINC01340-201ENST00000504012 MT1BP07438 61 aa2.04□□□□□ -2.08
LINC01340-201ENST00000504012 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
LINC01340-201ENST00000504012 MT2AP02795 61 aa2□□□□□ -2.09
LINC01340-201ENST00000504012 KRTAP12-4P60329 112 aa2□□□□□ -2.09
LINC01340-201ENST00000504012 KRTAP21-3Q3LHN1 58 aa2□□□□□ -2.09
LINC01340-201ENST00000504012 MT1FP04733 61 aa1.97□□□□□ -2.09
LINC01340-201ENST00000504012 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
LINC01340-201ENST00000504012 OBSCNQ5VST9 7968 aa1.95□□□□□ -2.1
LINC01340-201ENST00000504012 RYR3Q15413 4870 aa1.94□□□□□ -2.1
LINC01340-201ENST00000504012 MT1EP04732 61 aa1.93□□□□□ -2.1
LINC01340-201ENST00000504012 MT1HP80294 61 aa1.91□□□□□ -2.1
LINC01340-201ENST00000504012 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
LINC01340-201ENST00000504012 MT1LQ93083 61 aa1.89□□□□□ -2.11
LINC01340-201ENST00000504012 HMCN2Q8NDA2 5059 aa1.88□□□□□ -2.11
LINC01340-201ENST00000504012 MT1AP04731 61 aa1.88□□□□□ -2.11
LINC01340-201ENST00000504012 KRTAP19-7Q3SYF9 63 aa1.88□□□□□ -2.11
LINC01340-201ENST00000504012 HERC2O95714 4834 aa1.87□□□□□ -2.11
LINC01340-201ENST00000504012 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.12
LINC01340-201ENST00000504012 KIAA1109Q2LD37 5005 aa1.83□□□□□ -2.12
LINC01340-201ENST00000504012 MUC2Q02817 5179 aa1.82□□□□□ -2.12
LINC01340-201ENST00000504012 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
LINC01340-201ENST00000504012 PCLOQ9Y6V0 5065 aa1.79□□□□□ -2.12
LINC01340-201ENST00000504012 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
LINC01340-201ENST00000504012 PRM1P04553 51 aa1.77□□□□□ -2.13
LINC01340-201ENST00000504012 KRTAP5-5Q701N2 237 aaPredicted RBP1.77□□□□□ -2.13
LINC01340-201ENST00000504012 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
LINC01340-201ENST00000504012 UBR4Q5T4S7 5183 aa1.74□□□□□ -2.13
LINC01340-201ENST00000504012 EPPK1P58107 5090 aaKnown RBP1.71□□□□□ -2.14
LINC01340-201ENST00000504012 MT1GP13640 62 aa1.69□□□□□ -2.14
LINC01340-201ENST00000504012 MT1MQ8N339 61 aa1.66□□□□□ -2.14
LINC01340-201ENST00000504012 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
LINC01340-201ENST00000504012 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
LINC01340-201ENST00000504012 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
LINC01340-201ENST00000504012 SPRR2AP35326 72 aa1.59□□□□□ -2.15
LINC01340-201ENST00000504012 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
LINC01340-201ENST00000504012 FAT4Q6V0I7 4981 aa1.57□□□□□ -2.16
LINC01340-201ENST00000504012 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
LINC01340-201ENST00000504012 SPRR2BP35325 72 aa1.55□□□□□ -2.16
LINC01340-201ENST00000504012 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
LINC01340-201ENST00000504012 RNF213Q63HN8 5207 aa1.53□□□□□ -2.16
LINC01340-201ENST00000504012 SPRR2EP22531 72 aa1.52□□□□□ -2.17
LINC01340-201ENST00000504012 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
LINC01340-201ENST00000504012 SPRR2DP22532 72 aa1.49□□□□□ -2.17
LINC01340-201ENST00000504012 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
LINC01340-201ENST00000504012 KMT2DO14686 5537 aa1.47□□□□□ -2.17
LINC01340-201ENST00000504012 SSPOA2VEC9 5147 aa1.45□□□□□ -2.18
LINC01340-201ENST00000504012 USH2AO75445 5202 aa1.41□□□□□ -2.18
LINC01340-201ENST00000504012 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
LINC01340-201ENST00000504012 LCE1BQ5T7P3 118 aa1.39□□□□□ -2.19
LINC01340-201ENST00000504012 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
LINC01340-201ENST00000504012 FCGBPQ9Y6R7 5405 aaPredicted RBP1.24□□□□□ -2.21
LINC01340-201ENST00000504012 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
LINC01340-201ENST00000504012 MUC12Q9UKN1 5478 aa1.2□□□□□ -2.22
LINC01340-201ENST00000504012 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
LINC01340-201ENST00000504012 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
LINC01340-201ENST00000504012 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
LINC01340-201ENST00000504012 DSTQ03001 7570 aaKnown RBP1.11□□□□□ -2.23
LINC01340-201ENST00000504012 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
LINC01340-201ENST00000504012 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
LINC01340-201ENST00000504012 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
LINC01340-201ENST00000504012 SYNE2Q8WXH0 6885 aaKnown RBP0.96□□□□□ -2.26
LINC01340-201ENST00000504012 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
LINC01340-201ENST00000504012 KRTAP20-1Q3LI63 56 aa0.89□□□□□ -2.27
LINC01340-201ENST00000504012 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
LINC01340-201ENST00000504012 MACF1Q9UPN3 7388 aaKnown RBP0.85□□□□□ -2.27
LINC01340-201ENST00000504012 MT4P47944 62 aa0.83□□□□□ -2.28
LINC01340-201ENST00000504012 NEBP20929 6669 aa0.77□□□□□ -2.29
LINC01340-201ENST00000504012 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
LINC01340-201ENST00000504012 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
LINC01340-201ENST00000504012 AHNAK2Q8IVF2 5795 aa0.65□□□□□ -2.31
LINC01340-201ENST00000504012 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
LINC01340-201ENST00000504012 GPR98Q8WXG9 6306 aa0.33□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 8 ms