RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
SPCS3-201ENST00000503362 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
SPCS3-201ENST00000503362 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.73
SPCS3-201ENST00000503362 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
SPCS3-201ENST00000503362 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
SPCS3-201ENST00000503362 MT1MQ8N339 61 aa4.22□□□□□ -1.73
SPCS3-201ENST00000503362 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
SPCS3-201ENST00000503362 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
SPCS3-201ENST00000503362 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
SPCS3-201ENST00000503362 SPRR2EP22531 72 aa4.14□□□□□ -1.75
SPCS3-201ENST00000503362 SPRR2BP35325 72 aa4.14□□□□□ -1.75
SPCS3-201ENST00000503362 SPRR2AP35326 72 aa4.14□□□□□ -1.75
SPCS3-201ENST00000503362 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
SPCS3-201ENST00000503362 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
SPCS3-201ENST00000503362 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.76
SPCS3-201ENST00000503362 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
SPCS3-201ENST00000503362 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
SPCS3-201ENST00000503362 SPRR2DP22532 72 aa3.97□□□□□ -1.77
SPCS3-201ENST00000503362 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
SPCS3-201ENST00000503362 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
SPCS3-201ENST00000503362 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
SPCS3-201ENST00000503362 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
SPCS3-201ENST00000503362 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
SPCS3-201ENST00000503362 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
SPCS3-201ENST00000503362 MT1AP04731 61 aa3.83□□□□□ -1.8
SPCS3-201ENST00000503362 PRM1P04553 51 aa3.81□□□□□ -1.8
SPCS3-201ENST00000503362 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
SPCS3-201ENST00000503362 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
SPCS3-201ENST00000503362 MT3P25713 68 aa3.73□□□□□ -1.81
SPCS3-201ENST00000503362 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
SPCS3-201ENST00000503362 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
SPCS3-201ENST00000503362 MT4P47944 62 aa3.58□□□□□ -1.84
SPCS3-201ENST00000503362 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
SPCS3-201ENST00000503362 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SPCS3-201ENST00000503362 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
SPCS3-201ENST00000503362 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
SPCS3-201ENST00000503362 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
SPCS3-201ENST00000503362 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
SPCS3-201ENST00000503362 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
SPCS3-201ENST00000503362 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
SPCS3-201ENST00000503362 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
SPCS3-201ENST00000503362 KRTAP9-6A0A140TA67 174 aa3.35□□□□□ -1.87
SPCS3-201ENST00000503362 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
SPCS3-201ENST00000503362 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
SPCS3-201ENST00000503362 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.9
SPCS3-201ENST00000503362 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
SPCS3-201ENST00000503362 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
SPCS3-201ENST00000503362 NEBP20929 6669 aa3□□□□□ -1.93
SPCS3-201ENST00000503362 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
SPCS3-201ENST00000503362 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
SPCS3-201ENST00000503362 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
SPCS3-201ENST00000503362 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
SPCS3-201ENST00000503362 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
SPCS3-201ENST00000503362 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
SPCS3-201ENST00000503362 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
SPCS3-201ENST00000503362 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
SPCS3-201ENST00000503362 LCE1CQ5T751 118 aa2.57□□□□□ -2
SPCS3-201ENST00000503362 LCE1FQ5T754 118 aa2.57□□□□□ -2
SPCS3-201ENST00000503362 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
SPCS3-201ENST00000503362 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
SPCS3-201ENST00000503362 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
SPCS3-201ENST00000503362 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
SPCS3-201ENST00000503362 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
SPCS3-201ENST00000503362 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
SPCS3-201ENST00000503362 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
SPCS3-201ENST00000503362 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
SPCS3-201ENST00000503362 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
SPCS3-201ENST00000503362 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
SPCS3-201ENST00000503362 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
SPCS3-201ENST00000503362 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
SPCS3-201ENST00000503362 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
SPCS3-201ENST00000503362 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SPCS3-201ENST00000503362 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
SPCS3-201ENST00000503362 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
SPCS3-201ENST00000503362 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
SPCS3-201ENST00000503362 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SPCS3-201ENST00000503362 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms