RNA–Protein interactions for RNA: ENST00000497914.5

URGCP-213, Transcript of upregulator of cell proliferation, humanhuman

TSL 1 (best)

Gene URGCP, Length 4,360 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-213ENST00000497914 KRTAP4-3Q9BYR4 195 aa5.81□□□□□ -1.48
URGCP-213ENST00000497914 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
URGCP-213ENST00000497914 MT1EP04732 61 aa5.75□□□□□ -1.49
URGCP-213ENST00000497914 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
URGCP-213ENST00000497914 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
URGCP-213ENST00000497914 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
URGCP-213ENST00000497914 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
URGCP-213ENST00000497914 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
URGCP-213ENST00000497914 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
URGCP-213ENST00000497914 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
URGCP-213ENST00000497914 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
URGCP-213ENST00000497914 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
URGCP-213ENST00000497914 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
URGCP-213ENST00000497914 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
URGCP-213ENST00000497914 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
URGCP-213ENST00000497914 MT1MQ8N339 61 aa5.44□□□□□ -1.54
URGCP-213ENST00000497914 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
URGCP-213ENST00000497914 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
URGCP-213ENST00000497914 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
URGCP-213ENST00000497914 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
URGCP-213ENST00000497914 PRM1P04553 51 aa5.13□□□□□ -1.59
URGCP-213ENST00000497914 SPRR2EP22531 72 aa5.06□□□□□ -1.6
URGCP-213ENST00000497914 SPRR2BP35325 72 aa5.06□□□□□ -1.6
URGCP-213ENST00000497914 SPRR2AP35326 72 aa5.06□□□□□ -1.6
URGCP-213ENST00000497914 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
URGCP-213ENST00000497914 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
URGCP-213ENST00000497914 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
URGCP-213ENST00000497914 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
URGCP-213ENST00000497914 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
URGCP-213ENST00000497914 MT1AP04731 61 aa4.87□□□□□ -1.63
URGCP-213ENST00000497914 SPRR2DP22532 72 aa4.81□□□□□ -1.64
URGCP-213ENST00000497914 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
URGCP-213ENST00000497914 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
URGCP-213ENST00000497914 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
URGCP-213ENST00000497914 MT3P25713 68 aa4.64□□□□□ -1.67
URGCP-213ENST00000497914 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
URGCP-213ENST00000497914 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
URGCP-213ENST00000497914 MT4P47944 62 aa4.5□□□□□ -1.69
URGCP-213ENST00000497914 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
URGCP-213ENST00000497914 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
URGCP-213ENST00000497914 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
URGCP-213ENST00000497914 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
URGCP-213ENST00000497914 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
URGCP-213ENST00000497914 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
URGCP-213ENST00000497914 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.75
URGCP-213ENST00000497914 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
URGCP-213ENST00000497914 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
URGCP-213ENST00000497914 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
URGCP-213ENST00000497914 LCE1EQ5T753 118 aa3.84□□□□□ -1.8
URGCP-213ENST00000497914 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
URGCP-213ENST00000497914 NEBP20929 6669 aa3.76□□□□□ -1.81
URGCP-213ENST00000497914 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
URGCP-213ENST00000497914 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
URGCP-213ENST00000497914 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
URGCP-213ENST00000497914 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
URGCP-213ENST00000497914 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
URGCP-213ENST00000497914 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
URGCP-213ENST00000497914 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
URGCP-213ENST00000497914 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
URGCP-213ENST00000497914 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
URGCP-213ENST00000497914 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
URGCP-213ENST00000497914 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
URGCP-213ENST00000497914 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
URGCP-213ENST00000497914 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
URGCP-213ENST00000497914 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
URGCP-213ENST00000497914 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
URGCP-213ENST00000497914 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
URGCP-213ENST00000497914 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
URGCP-213ENST00000497914 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
URGCP-213ENST00000497914 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
URGCP-213ENST00000497914 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
URGCP-213ENST00000497914 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
URGCP-213ENST00000497914 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -2
URGCP-213ENST00000497914 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
URGCP-213ENST00000497914 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
URGCP-213ENST00000497914 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
URGCP-213ENST00000497914 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
URGCP-213ENST00000497914 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 150.5 ms