RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 CCDC179H3BU77 68 aa2.16□□□□□ -2.06
UBE3C-208ENST00000497368 M0QZ58 72 aa2.16□□□□□ -2.06
UBE3C-208ENST00000497368 SPANXA2-OT1Q8N9U9 137 aa2.16□□□□□ -2.06
UBE3C-208ENST00000497368 H7BZZ5 65 aa2.15□□□□□ -2.07
UBE3C-208ENST00000497368 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
UBE3C-208ENST00000497368 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
UBE3C-208ENST00000497368 R4GN34 69 aa2.14□□□□□ -2.07
UBE3C-208ENST00000497368 SEC61GP60059 68 aa2.13□□□□□ -2.07
UBE3C-208ENST00000497368 ACYP2P14621 99 aa2.12□□□□□ -2.07
UBE3C-208ENST00000497368 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
UBE3C-208ENST00000497368 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
UBE3C-208ENST00000497368 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
UBE3C-208ENST00000497368 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
UBE3C-208ENST00000497368 LINC01554Q52M75 96 aa2.11□□□□□ -2.07
UBE3C-208ENST00000497368 COA5Q86WW8 74 aa2.09□□□□□ -2.07
UBE3C-208ENST00000497368 MT1EP04732 61 aa2.08□□□□□ -2.08
UBE3C-208ENST00000497368 ATP5EP56381 51 aaPredicted RBP2.08□□□□□ -2.08
UBE3C-208ENST00000497368 TMEM258P61165 79 aa2.08□□□□□ -2.08
UBE3C-208ENST00000497368 CHKB-CPT1BH3BT56 60 aa2.07□□□□□ -2.08
UBE3C-208ENST00000497368 PP632Q6XCG6 107 aa2.07□□□□□ -2.08
UBE3C-208ENST00000497368 SPTSSBQ8NFR3 76 aa2.06□□□□□ -2.08
UBE3C-208ENST00000497368 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
UBE3C-208ENST00000497368 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
UBE3C-208ENST00000497368 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
UBE3C-208ENST00000497368 SERP1Q9Y6X1 66 aa2.01□□□□□ -2.09
UBE3C-208ENST00000497368 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
UBE3C-208ENST00000497368 MT1MQ8N339 61 aa1.98□□□□□ -2.09
UBE3C-208ENST00000497368 LINC01558Q9Y6Z2 57 aa1.98□□□□□ -2.09
UBE3C-208ENST00000497368 MT1LQ93083 61 aa1.97□□□□□ -2.09
UBE3C-208ENST00000497368 A0A1B0GU69 56 aa1.96□□□□□ -2.1
UBE3C-208ENST00000497368 MT1GP13640 62 aa1.95□□□□□ -2.1
UBE3C-208ENST00000497368 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
UBE3C-208ENST00000497368 RPS28P62857 69 aaKnown RBP1.95□□□□□ -2.1
UBE3C-208ENST00000497368 A0A1B0GU33 70 aa1.94□□□□□ -2.1
UBE3C-208ENST00000497368 V9GYY9 64 aa1.94□□□□□ -2.1
UBE3C-208ENST00000497368 SMIM26A0A096LP01 95 aa1.93□□□□□ -2.1
UBE3C-208ENST00000497368 A0A0D9SG42 100 aa1.93□□□□□ -2.1
UBE3C-208ENST00000497368 MT4P47944 62 aa1.93□□□□□ -2.1
UBE3C-208ENST00000497368 Q1T7F1 81 aa1.93□□□□□ -2.1
UBE3C-208ENST00000497368 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
UBE3C-208ENST00000497368 SPATA8Q6RVD6 105 aa1.93□□□□□ -2.1
UBE3C-208ENST00000497368 CAMK2N1Q7Z7J9 78 aa1.93□□□□□ -2.1
UBE3C-208ENST00000497368 PRR15LQ9BU68 103 aa1.93□□□□□ -2.1
UBE3C-208ENST00000497368 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.1
UBE3C-208ENST00000497368 C10orf95Q9H7T3 257 aa1.89□□□□□ -2.11
UBE3C-208ENST00000497368 UQCR11O14957 56 aa1.88□□□□□ -2.11
UBE3C-208ENST00000497368 PSPHP1O15172 72 aa1.88□□□□□ -2.11
UBE3C-208ENST00000497368 SPINT4Q6UDR6 99 aa1.86□□□□□ -2.11
UBE3C-208ENST00000497368 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
UBE3C-208ENST00000497368 MIR22HGQ0VDD5 57 aa1.85□□□□□ -2.11
UBE3C-208ENST00000497368 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
UBE3C-208ENST00000497368 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
UBE3C-208ENST00000497368 A6NED7 52 aa1.82□□□□□ -2.12
UBE3C-208ENST00000497368 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
UBE3C-208ENST00000497368 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
UBE3C-208ENST00000497368 K7ERS5 55 aa1.78□□□□□ -2.12
UBE3C-208ENST00000497368 TNP1P09430 55 aa1.77□□□□□ -2.13
UBE3C-208ENST00000497368 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
UBE3C-208ENST00000497368 PRO0628Q9UI54 55 aa1.75□□□□□ -2.13
UBE3C-208ENST00000497368 KRTAP25-1Q3LHN0 102 aa1.71□□□□□ -2.14
UBE3C-208ENST00000497368 BRK1Q8WUW1 75 aa1.71□□□□□ -2.14
UBE3C-208ENST00000497368 ROMO1P60602 79 aa1.7□□□□□ -2.14
UBE3C-208ENST00000497368 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
UBE3C-208ENST00000497368 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
UBE3C-208ENST00000497368 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
UBE3C-208ENST00000497368 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
UBE3C-208ENST00000497368 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
UBE3C-208ENST00000497368 MT1AP04731 61 aa1.66□□□□□ -2.14
UBE3C-208ENST00000497368 PMAIP1Q13794 54 aa1.65□□□□□ -2.15
UBE3C-208ENST00000497368 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
UBE3C-208ENST00000497368 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
UBE3C-208ENST00000497368 KTN1-AS1Q86SY8 53 aa1.56□□□□□ -2.16
UBE3C-208ENST00000497368 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
UBE3C-208ENST00000497368 INE1O15225 51 aa1.13□□□□□ -2.23
UBE3C-208ENST00000497368 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
UBE3C-208ENST00000497368 PRM1P04553 51 aa0.88□□□□□ -2.27
UBE3C-208ENST00000497368 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
UBE3C-208ENST00000497368 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms