RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
ITGA6-211ENST00000497107 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
ITGA6-211ENST00000497107 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
ITGA6-211ENST00000497107 FLGP20930 4061 aaPredicted RBP2.8□□□□□ -1.96
ITGA6-211ENST00000497107 M0R2T5 61 aa2.78□□□□□ -1.96
ITGA6-211ENST00000497107 RNF213Q63HN8 5207 aa2.75□□□□□ -1.97
ITGA6-211ENST00000497107 MT1HP80294 61 aa2.75□□□□□ -1.97
ITGA6-211ENST00000497107 MUC2Q02817 5179 aa2.72□□□□□ -1.97
ITGA6-211ENST00000497107 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
ITGA6-211ENST00000497107 SPRR2GQ9BYE4 73 aa2.7□□□□□ -1.98
ITGA6-211ENST00000497107 C10orf95Q9H7T3 257 aa2.7□□□□□ -1.98
ITGA6-211ENST00000497107 MT2AP02795 61 aa2.69□□□□□ -1.98
ITGA6-211ENST00000497107 PLAC4Q8WY50 150 aa2.69□□□□□ -1.98
ITGA6-211ENST00000497107 UBR4Q5T4S7 5183 aa2.67□□□□□ -1.98
ITGA6-211ENST00000497107 MT1FP04733 61 aa2.66□□□□□ -1.98
ITGA6-211ENST00000497107 FAT4Q6V0I7 4981 aa2.64□□□□□ -1.99
ITGA6-211ENST00000497107 TNP1P09430 55 aa2.63□□□□□ -1.99
ITGA6-211ENST00000497107 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
ITGA6-211ENST00000497107 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
ITGA6-211ENST00000497107 MT1BP07438 61 aa2.56□□□□□ -2
ITGA6-211ENST00000497107 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
ITGA6-211ENST00000497107 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
ITGA6-211ENST00000497107 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
ITGA6-211ENST00000497107 MT1XP80297 61 aa2.49□□□□□ -2.01
ITGA6-211ENST00000497107 KRTAP8-1Q8IUC2 63 aa2.43□□□□□ -2.02
ITGA6-211ENST00000497107 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
ITGA6-211ENST00000497107 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
ITGA6-211ENST00000497107 USH2AO75445 5202 aa2.35□□□□□ -2.03
ITGA6-211ENST00000497107 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
ITGA6-211ENST00000497107 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
ITGA6-211ENST00000497107 KRTAP19-5Q3LI72 72 aa2.3□□□□□ -2.04
ITGA6-211ENST00000497107 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
ITGA6-211ENST00000497107 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
ITGA6-211ENST00000497107 MT1EP04732 61 aa2.18□□□□□ -2.06
ITGA6-211ENST00000497107 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
ITGA6-211ENST00000497107 MT1LQ93083 61 aa2.16□□□□□ -2.06
ITGA6-211ENST00000497107 KMT2DO14686 5537 aa2.15□□□□□ -2.07
ITGA6-211ENST00000497107 FCGBPQ9Y6R7 5405 aaPredicted RBP2.12□□□□□ -2.07
ITGA6-211ENST00000497107 MT1GP13640 62 aa2.1□□□□□ -2.07
ITGA6-211ENST00000497107 KRTAP19-3Q7Z4W3 81 aa2.09□□□□□ -2.07
ITGA6-211ENST00000497107 FSIP2Q5CZC0 6907 aa2.07□□□□□ -2.08
ITGA6-211ENST00000497107 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
ITGA6-211ENST00000497107 CRCT1Q9UGL9 99 aa2.07□□□□□ -2.08
ITGA6-211ENST00000497107 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
ITGA6-211ENST00000497107 MT1MQ8N339 61 aa2.05□□□□□ -2.08
ITGA6-211ENST00000497107 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
ITGA6-211ENST00000497107 INE1O15225 51 aa2□□□□□ -2.09
ITGA6-211ENST00000497107 KRTAP2-3P0C7H8 128 aa2□□□□□ -2.09
ITGA6-211ENST00000497107 KRTAP2-4Q9BYR9 128 aa2□□□□□ -2.09
ITGA6-211ENST00000497107 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
ITGA6-211ENST00000497107 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
ITGA6-211ENST00000497107 SPRR2EP22531 72 aa1.93□□□□□ -2.1
ITGA6-211ENST00000497107 SPRR2BP35325 72 aa1.93□□□□□ -2.1
ITGA6-211ENST00000497107 SPRR2AP35326 72 aa1.93□□□□□ -2.1
ITGA6-211ENST00000497107 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
ITGA6-211ENST00000497107 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
ITGA6-211ENST00000497107 SPRR2DP22532 72 aa1.86□□□□□ -2.11
ITGA6-211ENST00000497107 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
ITGA6-211ENST00000497107 MT1AP04731 61 aa1.85□□□□□ -2.11
ITGA6-211ENST00000497107 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
ITGA6-211ENST00000497107 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
ITGA6-211ENST00000497107 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
ITGA6-211ENST00000497107 SYNE1Q8NF91 8797 aaKnown RBP1.72□□□□□ -2.13
ITGA6-211ENST00000497107 NEBP20929 6669 aa1.68□□□□□ -2.14
ITGA6-211ENST00000497107 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
ITGA6-211ENST00000497107 MT4P47944 62 aa1.6□□□□□ -2.15
ITGA6-211ENST00000497107 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
ITGA6-211ENST00000497107 KRTAP20-1Q3LI63 56 aa1.58□□□□□ -2.16
ITGA6-211ENST00000497107 PRM1P04553 51 aa1.5□□□□□ -2.17
ITGA6-211ENST00000497107 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
ITGA6-211ENST00000497107 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
ITGA6-211ENST00000497107 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
ITGA6-211ENST00000497107 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
ITGA6-211ENST00000497107 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.24
ITGA6-211ENST00000497107 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
ITGA6-211ENST00000497107 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
ITGA6-211ENST00000497107 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
ITGA6-211ENST00000497107 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms