RNA–Protein interactions for RNA: ENST00000496722.1

UBE2L3-203, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2

Gene UBE2L3, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-203ENST00000496722 MT1EP04732 61 aa4.83□□□□□ -1.64
UBE2L3-203ENST00000496722 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
UBE2L3-203ENST00000496722 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
UBE2L3-203ENST00000496722 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
UBE2L3-203ENST00000496722 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
UBE2L3-203ENST00000496722 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
UBE2L3-203ENST00000496722 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
UBE2L3-203ENST00000496722 MT1GP13640 62 aa4.69□□□□□ -1.66
UBE2L3-203ENST00000496722 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
UBE2L3-203ENST00000496722 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
UBE2L3-203ENST00000496722 MT1MQ8N339 61 aa4.51□□□□□ -1.69
UBE2L3-203ENST00000496722 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
UBE2L3-203ENST00000496722 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
UBE2L3-203ENST00000496722 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
UBE2L3-203ENST00000496722 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
UBE2L3-203ENST00000496722 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
UBE2L3-203ENST00000496722 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
UBE2L3-203ENST00000496722 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
UBE2L3-203ENST00000496722 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
UBE2L3-203ENST00000496722 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
UBE2L3-203ENST00000496722 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
UBE2L3-203ENST00000496722 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
UBE2L3-203ENST00000496722 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
UBE2L3-203ENST00000496722 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
UBE2L3-203ENST00000496722 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
UBE2L3-203ENST00000496722 MT1AP04731 61 aa3.99□□□□□ -1.77
UBE2L3-203ENST00000496722 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
UBE2L3-203ENST00000496722 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
UBE2L3-203ENST00000496722 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
UBE2L3-203ENST00000496722 PRM1P04553 51 aa3.94□□□□□ -1.78
UBE2L3-203ENST00000496722 SPRR2EP22531 72 aa3.91□□□□□ -1.78
UBE2L3-203ENST00000496722 SPRR2BP35325 72 aa3.91□□□□□ -1.78
UBE2L3-203ENST00000496722 SPRR2AP35326 72 aa3.91□□□□□ -1.78
UBE2L3-203ENST00000496722 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
UBE2L3-203ENST00000496722 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
UBE2L3-203ENST00000496722 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
UBE2L3-203ENST00000496722 SPRR2DP22532 72 aa3.71□□□□□ -1.82
UBE2L3-203ENST00000496722 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.82
UBE2L3-203ENST00000496722 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
UBE2L3-203ENST00000496722 MT3P25713 68 aa3.58□□□□□ -1.84
UBE2L3-203ENST00000496722 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
UBE2L3-203ENST00000496722 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
UBE2L3-203ENST00000496722 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
UBE2L3-203ENST00000496722 MT4P47944 62 aa3.43□□□□□ -1.86
UBE2L3-203ENST00000496722 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
UBE2L3-203ENST00000496722 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.87
UBE2L3-203ENST00000496722 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
UBE2L3-203ENST00000496722 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
UBE2L3-203ENST00000496722 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
UBE2L3-203ENST00000496722 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
UBE2L3-203ENST00000496722 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
UBE2L3-203ENST00000496722 NEBP20929 6669 aa3.28□□□□□ -1.88
UBE2L3-203ENST00000496722 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
UBE2L3-203ENST00000496722 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
UBE2L3-203ENST00000496722 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.89
UBE2L3-203ENST00000496722 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
UBE2L3-203ENST00000496722 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
UBE2L3-203ENST00000496722 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
UBE2L3-203ENST00000496722 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
UBE2L3-203ENST00000496722 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
UBE2L3-203ENST00000496722 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
UBE2L3-203ENST00000496722 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
UBE2L3-203ENST00000496722 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
UBE2L3-203ENST00000496722 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
UBE2L3-203ENST00000496722 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
UBE2L3-203ENST00000496722 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
UBE2L3-203ENST00000496722 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
UBE2L3-203ENST00000496722 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
UBE2L3-203ENST00000496722 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
UBE2L3-203ENST00000496722 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
UBE2L3-203ENST00000496722 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
UBE2L3-203ENST00000496722 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
UBE2L3-203ENST00000496722 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
UBE2L3-203ENST00000496722 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
UBE2L3-203ENST00000496722 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
UBE2L3-203ENST00000496722 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
UBE2L3-203ENST00000496722 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
UBE2L3-203ENST00000496722 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 83.1 ms