RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 SPRR2BP35325 72 aa4.49□□□□□ -1.69
PKD1-222ENST00000496574 SPRR2AP35326 72 aa4.49□□□□□ -1.69
PKD1-222ENST00000496574 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
PKD1-222ENST00000496574 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
PKD1-222ENST00000496574 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
PKD1-222ENST00000496574 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
PKD1-222ENST00000496574 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
PKD1-222ENST00000496574 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
PKD1-222ENST00000496574 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
PKD1-222ENST00000496574 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
PKD1-222ENST00000496574 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
PKD1-222ENST00000496574 MT1MQ8N339 61 aa4.35□□□□□ -1.71
PKD1-222ENST00000496574 SPRR2DP22532 72 aa4.35□□□□□ -1.71
PKD1-222ENST00000496574 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
PKD1-222ENST00000496574 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
PKD1-222ENST00000496574 PRM1P04553 51 aa4.32□□□□□ -1.72
PKD1-222ENST00000496574 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
PKD1-222ENST00000496574 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
PKD1-222ENST00000496574 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
PKD1-222ENST00000496574 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
PKD1-222ENST00000496574 MT3P25713 68 aa4.09□□□□□ -1.76
PKD1-222ENST00000496574 USH2AO75445 5202 aa4.08□□□□□ -1.76
PKD1-222ENST00000496574 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
PKD1-222ENST00000496574 MT1AP04731 61 aa4.05□□□□□ -1.76
PKD1-222ENST00000496574 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
PKD1-222ENST00000496574 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
PKD1-222ENST00000496574 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
PKD1-222ENST00000496574 KMT2DO14686 5537 aa3.95□□□□□ -1.78
PKD1-222ENST00000496574 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
PKD1-222ENST00000496574 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
PKD1-222ENST00000496574 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
PKD1-222ENST00000496574 MT4P47944 62 aa3.84□□□□□ -1.79
PKD1-222ENST00000496574 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
PKD1-222ENST00000496574 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
PKD1-222ENST00000496574 LCE5AQ5TCM9 118 aa3.82□□□□□ -1.8
PKD1-222ENST00000496574 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
PKD1-222ENST00000496574 LCE1DQ5T752 114 aa3.71□□□□□ -1.81
PKD1-222ENST00000496574 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
PKD1-222ENST00000496574 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
PKD1-222ENST00000496574 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
PKD1-222ENST00000496574 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
PKD1-222ENST00000496574 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
PKD1-222ENST00000496574 MDN1Q9NU22 5596 aa3.59□□□□□ -1.83
PKD1-222ENST00000496574 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
PKD1-222ENST00000496574 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
PKD1-222ENST00000496574 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
PKD1-222ENST00000496574 NEBP20929 6669 aa3.42□□□□□ -1.86
PKD1-222ENST00000496574 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
PKD1-222ENST00000496574 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
PKD1-222ENST00000496574 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
PKD1-222ENST00000496574 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
PKD1-222ENST00000496574 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
PKD1-222ENST00000496574 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
PKD1-222ENST00000496574 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
PKD1-222ENST00000496574 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
PKD1-222ENST00000496574 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
PKD1-222ENST00000496574 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
PKD1-222ENST00000496574 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
PKD1-222ENST00000496574 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
PKD1-222ENST00000496574 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
PKD1-222ENST00000496574 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
PKD1-222ENST00000496574 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
PKD1-222ENST00000496574 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
PKD1-222ENST00000496574 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
PKD1-222ENST00000496574 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
PKD1-222ENST00000496574 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
PKD1-222ENST00000496574 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
PKD1-222ENST00000496574 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
PKD1-222ENST00000496574 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
PKD1-222ENST00000496574 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
PKD1-222ENST00000496574 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PKD1-222ENST00000496574 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
PKD1-222ENST00000496574 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
PKD1-222ENST00000496574 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
PKD1-222ENST00000496574 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
PKD1-222ENST00000496574 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
PKD1-222ENST00000496574 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
PKD1-222ENST00000496574 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms