RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 FAT3Q8TDW7 4589 aa1.67□□□□□ -2.14
VPS8-226ENST00000495190 HSPG2P98160 4391 aa1.67□□□□□ -2.14
VPS8-226ENST00000495190 FAT1Q14517 4588 aa1.67□□□□□ -2.14
VPS8-226ENST00000495190 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
VPS8-226ENST00000495190 SPRR2GQ9BYE4 73 aa1.66□□□□□ -2.14
VPS8-226ENST00000495190 MYCBP2O75592 4640 aa1.66□□□□□ -2.14
VPS8-226ENST00000495190 DNHD1Q96M86 4753 aa1.58□□□□□ -2.16
VPS8-226ENST00000495190 KRTAP19-8Q3LI54 63 aa1.57□□□□□ -2.16
VPS8-226ENST00000495190 FLGP20930 4061 aaPredicted RBP1.56□□□□□ -2.16
VPS8-226ENST00000495190 HYDINQ4G0P3 5121 aa1.55□□□□□ -2.16
VPS8-226ENST00000495190 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
VPS8-226ENST00000495190 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
VPS8-226ENST00000495190 KRTAP2-1Q9BYU5 128 aa1.54□□□□□ -2.16
VPS8-226ENST00000495190 HERC1Q15751 4861 aa1.51□□□□□ -2.17
VPS8-226ENST00000495190 MT1XP80297 61 aa1.51□□□□□ -2.17
VPS8-226ENST00000495190 LRP2P98164 4655 aa1.51□□□□□ -2.17
VPS8-226ENST00000495190 MUC17Q685J3 4493 aa1.48□□□□□ -2.17
VPS8-226ENST00000495190 MT1BP07438 61 aa1.48□□□□□ -2.17
VPS8-226ENST00000495190 RYR2Q92736 4967 aa1.48□□□□□ -2.17
VPS8-226ENST00000495190 M0R2T5 61 aa1.47□□□□□ -2.17
VPS8-226ENST00000495190 MT2AP02795 61 aa1.47□□□□□ -2.17
VPS8-226ENST00000495190 MT1FP04733 61 aa1.45□□□□□ -2.18
VPS8-226ENST00000495190 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
VPS8-226ENST00000495190 LPAP08519 4548 aa1.45□□□□□ -2.18
VPS8-226ENST00000495190 RYR1P21817 5038 aa1.44□□□□□ -2.18
VPS8-226ENST00000495190 KMT2CQ8NEZ4 4911 aaKnown RBP1.43□□□□□ -2.18
VPS8-226ENST00000495190 MT1HP80294 61 aa1.43□□□□□ -2.18
VPS8-226ENST00000495190 MT1EP04732 61 aa1.36□□□□□ -2.19
VPS8-226ENST00000495190 KRTAP19-7Q3SYF9 63 aa1.34□□□□□ -2.19
VPS8-226ENST00000495190 MT1LQ93083 61 aa1.34□□□□□ -2.19
VPS8-226ENST00000495190 KIAA1109Q2LD37 5005 aa1.33□□□□□ -2.2
VPS8-226ENST00000495190 RYR3Q15413 4870 aa1.33□□□□□ -2.2
VPS8-226ENST00000495190 BIRC6Q9NR09 4857 aa1.31□□□□□ -2.2
VPS8-226ENST00000495190 MT1AP04731 61 aa1.31□□□□□ -2.2
VPS8-226ENST00000495190 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
VPS8-226ENST00000495190 HERC2O95714 4834 aa1.29□□□□□ -2.2
VPS8-226ENST00000495190 ABCA13Q86UQ4 5058 aa1.27□□□□□ -2.21
VPS8-226ENST00000495190 MT1GP13640 62 aa1.24□□□□□ -2.21
VPS8-226ENST00000495190 MUC2Q02817 5179 aa1.22□□□□□ -2.21
VPS8-226ENST00000495190 PCLOQ9Y6V0 5065 aa1.21□□□□□ -2.22
VPS8-226ENST00000495190 PRM1P04553 51 aa1.2□□□□□ -2.22
VPS8-226ENST00000495190 MT1MQ8N339 61 aa1.2□□□□□ -2.22
VPS8-226ENST00000495190 EPPK1P58107 5090 aaKnown RBP1.19□□□□□ -2.22
VPS8-226ENST00000495190 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
VPS8-226ENST00000495190 UBR4Q5T4S7 5183 aa1.17□□□□□ -2.22
VPS8-226ENST00000495190 SPRR2FQ96RM1 72 aa1.16□□□□□ -2.22
VPS8-226ENST00000495190 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
VPS8-226ENST00000495190 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
VPS8-226ENST00000495190 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
VPS8-226ENST00000495190 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
VPS8-226ENST00000495190 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
VPS8-226ENST00000495190 SPRR2AP35326 72 aa1.11□□□□□ -2.23
VPS8-226ENST00000495190 FAT4Q6V0I7 4981 aa1.11□□□□□ -2.23
VPS8-226ENST00000495190 KRTAP6-1Q3LI64 71 aa1.1□□□□□ -2.23
VPS8-226ENST00000495190 RNF213Q63HN8 5207 aa1.09□□□□□ -2.24
VPS8-226ENST00000495190 SPRR2BP35325 72 aa1.07□□□□□ -2.24
VPS8-226ENST00000495190 SPRR2EP22531 72 aa1.05□□□□□ -2.24
VPS8-226ENST00000495190 SPRR2DP22532 72 aa1.02□□□□□ -2.25
VPS8-226ENST00000495190 KMT2DO14686 5537 aa1□□□□□ -2.25
VPS8-226ENST00000495190 SSPOA2VEC9 5147 aa1□□□□□ -2.25
VPS8-226ENST00000495190 USH2AO75445 5202 aa0.98□□□□□ -2.25
VPS8-226ENST00000495190 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
VPS8-226ENST00000495190 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
VPS8-226ENST00000495190 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
VPS8-226ENST00000495190 SYNE2Q8WXH0 6885 aaKnown RBP0.77□□□□□ -2.29
VPS8-226ENST00000495190 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
VPS8-226ENST00000495190 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
VPS8-226ENST00000495190 FSIP2Q5CZC0 6907 aa0.75□□□□□ -2.29
VPS8-226ENST00000495190 AHNAK2Q8IVF2 5795 aa0.74□□□□□ -2.29
VPS8-226ENST00000495190 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
VPS8-226ENST00000495190 KRTAP20-1Q3LI63 56 aa0.7□□□□□ -2.3
VPS8-226ENST00000495190 MACF1Q9UPN3 7388 aaKnown RBP0.7□□□□□ -2.3
VPS8-226ENST00000495190 MT4P47944 62 aa0.68□□□□□ -2.3
VPS8-226ENST00000495190 NEBP20929 6669 aa0.62□□□□□ -2.31
VPS8-226ENST00000495190 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
VPS8-226ENST00000495190 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
VPS8-226ENST00000495190 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
VPS8-226ENST00000495190 GPR98Q8WXG9 6306 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 37.9 ms