RNA–Protein interactions for RNA: ENST00000494954.1

PNKD-208, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 248 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-208ENST00000494954 M0R143 59 aa1.75□□□□□ -2.13
PNKD-208ENST00000494954 PYY3Q5JQD4 70 aa1.74□□□□□ -2.13
PNKD-208ENST00000494954 KRTAP13-4Q3LI77 160 aa1.73□□□□□ -2.13
PNKD-208ENST00000494954 A8MU10 97 aa1.72□□□□□ -2.13
PNKD-208ENST00000494954 MT1AP04731 61 aa1.7□□□□□ -2.14
PNKD-208ENST00000494954 SPTSSBQ8NFR3 76 aa1.7□□□□□ -2.14
PNKD-208ENST00000494954 LINC00208Q96KT6 92 aa1.7□□□□□ -2.14
PNKD-208ENST00000494954 H3BPC8 53 aa1.69□□□□□ -2.14
PNKD-208ENST00000494954 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
PNKD-208ENST00000494954 KRTAP6-1Q3LI64 71 aa1.67□□□□□ -2.14
PNKD-208ENST00000494954 PRO0461Q9UI25 63 aa1.67□□□□□ -2.14
PNKD-208ENST00000494954 MP68P56378 58 aa1.66□□□□□ -2.14
PNKD-208ENST00000494954 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
PNKD-208ENST00000494954 ATP5EP2Q5VTU8 51 aa1.66□□□□□ -2.14
PNKD-208ENST00000494954 OCR1Q9BZK8 76 aa1.66□□□□□ -2.14
PNKD-208ENST00000494954 ACYP2P14621 99 aa1.64□□□□□ -2.15
PNKD-208ENST00000494954 TNP1P09430 55 aa1.63□□□□□ -2.15
PNKD-208ENST00000494954 KRTAP12-1P59990 96 aa1.62□□□□□ -2.15
PNKD-208ENST00000494954 PCP4L1A6NKN8 68 aa1.6□□□□□ -2.15
PNKD-208ENST00000494954 SMIM6P0DI80 62 aa1.59□□□□□ -2.15
PNKD-208ENST00000494954 FAM240AA0A1B0GVK7 77 aa1.58□□□□□ -2.16
PNKD-208ENST00000494954 PRAC1Q96KF2 57 aa1.58□□□□□ -2.16
PNKD-208ENST00000494954 A0A1B0GV90 55 aa1.55□□□□□ -2.16
PNKD-208ENST00000494954 HIST1H4AP62805 103 aaKnown RBP1.55□□□□□ -2.16
PNKD-208ENST00000494954 SPINT4Q6UDR6 99 aa1.54□□□□□ -2.16
PNKD-208ENST00000494954 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
PNKD-208ENST00000494954 F8W1H4 67 aa1.52□□□□□ -2.17
PNKD-208ENST00000494954 CHKB-CPT1BH3BT56 60 aa1.52□□□□□ -2.17
PNKD-208ENST00000494954 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
PNKD-208ENST00000494954 SCGB1A1P11684 91 aa1.51□□□□□ -2.17
PNKD-208ENST00000494954 KRTAP25-1Q3LHN0 102 aa1.5□□□□□ -2.17
PNKD-208ENST00000494954 SPATA8Q6RVD6 105 aa1.5□□□□□ -2.17
PNKD-208ENST00000494954 ETDBQ3ZM63 59 aa1.49□□□□□ -2.17
PNKD-208ENST00000494954 LINC00643Q86TS7 51 aa1.49□□□□□ -2.17
PNKD-208ENST00000494954 A0A1B0GU33 70 aa1.48□□□□□ -2.17
PNKD-208ENST00000494954 COL5A1-AS1Q5SY13 56 aa1.47□□□□□ -2.17
PNKD-208ENST00000494954 SMIM26A0A096LP01 95 aa1.46□□□□□ -2.18
PNKD-208ENST00000494954 SPANXA2-OT1Q8N9U9 137 aa1.46□□□□□ -2.18
PNKD-208ENST00000494954 SEC61GP60059 68 aa1.45□□□□□ -2.18
PNKD-208ENST00000494954 SERP1Q9Y6X1 66 aa1.44□□□□□ -2.18
PNKD-208ENST00000494954 GTF2H5Q6ZYL4 71 aa1.43□□□□□ -2.18
PNKD-208ENST00000494954 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
PNKD-208ENST00000494954 SVIPQ8NHG7 77 aa1.4□□□□□ -2.19
PNKD-208ENST00000494954 SMIM20Q8N5G0 67 aa1.36□□□□□ -2.19
PNKD-208ENST00000494954 COA5Q86WW8 74 aa1.33□□□□□ -2.2
PNKD-208ENST00000494954 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
PNKD-208ENST00000494954 CCDC179H3BU77 68 aa1.29□□□□□ -2.2
PNKD-208ENST00000494954 SERP2Q8N6R1 65 aa1.29□□□□□ -2.2
PNKD-208ENST00000494954 H7BZZ5 65 aa1.28□□□□□ -2.2
PNKD-208ENST00000494954 K7ERU9 68 aa1.28□□□□□ -2.2
PNKD-208ENST00000494954 PRR15LQ9BU68 103 aa1.27□□□□□ -2.21
PNKD-208ENST00000494954 A0A1B0GU69 56 aa1.26□□□□□ -2.21
PNKD-208ENST00000494954 SNURFQ9Y675 71 aa1.26□□□□□ -2.21
PNKD-208ENST00000494954 J3QR89 54 aa1.23□□□□□ -2.21
PNKD-208ENST00000494954 COX7CP15954 63 aa1.22□□□□□ -2.21
PNKD-208ENST00000494954 ANAPC13Q9BS18 74 aa1.19□□□□□ -2.22
PNKD-208ENST00000494954 UQCR11O14957 56 aa1.12□□□□□ -2.23
PNKD-208ENST00000494954 RPS28P62857 69 aaKnown RBP1.11□□□□□ -2.23
PNKD-208ENST00000494954 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
PNKD-208ENST00000494954 TMEM258P61165 79 aa1.1□□□□□ -2.23
PNKD-208ENST00000494954 PSPHP1O15172 72 aa1.08□□□□□ -2.24
PNKD-208ENST00000494954 LINC01558Q9Y6Z2 57 aa1.08□□□□□ -2.24
PNKD-208ENST00000494954 K7ERS5 55 aa1.07□□□□□ -2.24
PNKD-208ENST00000494954 Q1T7F1 81 aa1.06□□□□□ -2.24
PNKD-208ENST00000494954 ATP5EP56381 51 aaPredicted RBP1.03□□□□□ -2.24
PNKD-208ENST00000494954 MIR22HGQ0VDD5 57 aa1.01□□□□□ -2.25
PNKD-208ENST00000494954 A6NED7 52 aa0.97□□□□□ -2.25
PNKD-208ENST00000494954 CDC42SE1Q9NRR8 79 aa0.97□□□□□ -2.25
PNKD-208ENST00000494954 ROMO1P60602 79 aa0.94□□□□□ -2.26
PNKD-208ENST00000494954 BRK1Q8WUW1 75 aa0.94□□□□□ -2.26
PNKD-208ENST00000494954 V9GYY9 64 aa0.93□□□□□ -2.26
PNKD-208ENST00000494954 PRO0628Q9UI54 55 aa0.88□□□□□ -2.27
PNKD-208ENST00000494954 PMAIP1Q13794 54 aa0.87□□□□□ -2.27
PNKD-208ENST00000494954 KTN1-AS1Q86SY8 53 aa0.81□□□□□ -2.28
PNKD-208ENST00000494954 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
PNKD-208ENST00000494954 LUZP6Q538Z0 58 aa0.55□□□□□ -2.32
PNKD-208ENST00000494954 PRM1P04553 51 aa0.52□□□□□ -2.33
PNKD-208ENST00000494954 INE1O15225 51 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 59.8 ms