RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 MUC2Q02817 5179 aa1.74□□□□□ -2.13
SMG7-208ENST00000493609 Q1T7F1 81 aa1.73□□□□□ -2.13
SMG7-208ENST00000493609 S4R3F8 94 aa1.73□□□□□ -2.13
SMG7-208ENST00000493609 LINC01558Q9Y6Z2 57 aa1.72□□□□□ -2.13
SMG7-208ENST00000493609 CHKB-CPT1BH3BT56 60 aa1.71□□□□□ -2.14
SMG7-208ENST00000493609 LCA10Q71F78 164 aa1.71□□□□□ -2.14
SMG7-208ENST00000493609 CSAG1Q6PB30 78 aa1.7□□□□□ -2.14
SMG7-208ENST00000493609 MT1HP80294 61 aa1.69□□□□□ -2.14
SMG7-208ENST00000493609 PRR15LQ9BU68 103 aa1.68□□□□□ -2.14
SMG7-208ENST00000493609 CRIPTQ9P021 101 aa1.68□□□□□ -2.14
SMG7-208ENST00000493609 A0A1B0GU69 56 aa1.66□□□□□ -2.14
SMG7-208ENST00000493609 Q5VV11 94 aa1.66□□□□□ -2.14
SMG7-208ENST00000493609 A6NN06 94 aa1.65□□□□□ -2.15
SMG7-208ENST00000493609 M0QZ58 72 aa1.65□□□□□ -2.15
SMG7-208ENST00000493609 UQCR11O14957 56 aa1.64□□□□□ -2.15
SMG7-208ENST00000493609 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
SMG7-208ENST00000493609 CDC42SE1Q9NRR8 79 aa1.62□□□□□ -2.15
SMG7-208ENST00000493609 MT2AP02795 61 aa1.61□□□□□ -2.15
SMG7-208ENST00000493609 SPATA8Q6RVD6 105 aa1.61□□□□□ -2.15
SMG7-208ENST00000493609 M0R2T5 61 aa1.59□□□□□ -2.15
SMG7-208ENST00000493609 MT1FP04733 61 aa1.59□□□□□ -2.15
SMG7-208ENST00000493609 KRTAP19-8Q3LI54 63 aa1.59□□□□□ -2.15
SMG7-208ENST00000493609 MIR22HGQ0VDD5 57 aa1.58□□□□□ -2.16
SMG7-208ENST00000493609 MT1BP07438 61 aa1.53□□□□□ -2.16
SMG7-208ENST00000493609 BRK1Q8WUW1 75 aa1.53□□□□□ -2.16
SMG7-208ENST00000493609 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
SMG7-208ENST00000493609 PMAIP1Q13794 54 aa1.49□□□□□ -2.17
SMG7-208ENST00000493609 KRTAP19-6Q3LI70 58 aa1.49□□□□□ -2.17
SMG7-208ENST00000493609 PLAC4Q8WY50 150 aa1.49□□□□□ -2.17
SMG7-208ENST00000493609 USH2AO75445 5202 aa1.47□□□□□ -2.17
SMG7-208ENST00000493609 A0A0D9SG42 100 aa1.47□□□□□ -2.17
SMG7-208ENST00000493609 MT1XP80297 61 aa1.47□□□□□ -2.17
SMG7-208ENST00000493609 ROMO1P60602 79 aa1.46□□□□□ -2.18
SMG7-208ENST00000493609 LINC01554Q52M75 96 aa1.46□□□□□ -2.18
SMG7-208ENST00000493609 TNP1P09430 55 aa1.43□□□□□ -2.18
SMG7-208ENST00000493609 C10orf95Q9H7T3 257 aa1.43□□□□□ -2.18
SMG7-208ENST00000493609 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
SMG7-208ENST00000493609 FSIP2Q5CZC0 6907 aa1.38□□□□□ -2.19
SMG7-208ENST00000493609 KRTAP19-7Q3SYF9 63 aa1.32□□□□□ -2.2
SMG7-208ENST00000493609 MACF1Q9UPN3 7388 aaKnown RBP1.31□□□□□ -2.2
SMG7-208ENST00000493609 MT1EP04732 61 aa1.3□□□□□ -2.2
SMG7-208ENST00000493609 KMT2DO14686 5537 aa1.29□□□□□ -2.2
SMG7-208ENST00000493609 KRTAP19-5Q3LI72 72 aa1.28□□□□□ -2.2
SMG7-208ENST00000493609 MT1GP13640 62 aa1.26□□□□□ -2.21
SMG7-208ENST00000493609 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
SMG7-208ENST00000493609 MT1LQ93083 61 aa1.26□□□□□ -2.21
SMG7-208ENST00000493609 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
SMG7-208ENST00000493609 MUC12Q9UKN1 5478 aa1.23□□□□□ -2.21
SMG7-208ENST00000493609 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
SMG7-208ENST00000493609 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
SMG7-208ENST00000493609 MT1MQ8N339 61 aa1.22□□□□□ -2.21
SMG7-208ENST00000493609 SPRR2EP22531 72 aa1.18□□□□□ -2.22
SMG7-208ENST00000493609 SPRR2BP35325 72 aa1.18□□□□□ -2.22
SMG7-208ENST00000493609 SPRR2AP35326 72 aa1.18□□□□□ -2.22
SMG7-208ENST00000493609 NEBP20929 6669 aa1.17□□□□□ -2.22
SMG7-208ENST00000493609 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
SMG7-208ENST00000493609 SPRR2DP22532 72 aa1.14□□□□□ -2.23
SMG7-208ENST00000493609 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
SMG7-208ENST00000493609 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
SMG7-208ENST00000493609 DSTQ03001 7570 aaKnown RBP1.11□□□□□ -2.23
SMG7-208ENST00000493609 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
SMG7-208ENST00000493609 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
SMG7-208ENST00000493609 MT1AP04731 61 aa1.1□□□□□ -2.23
SMG7-208ENST00000493609 KRTAP2-1Q9BYU5 128 aa1.1□□□□□ -2.23
SMG7-208ENST00000493609 INE1O15225 51 aa1.09□□□□□ -2.23
SMG7-208ENST00000493609 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
SMG7-208ENST00000493609 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.24
SMG7-208ENST00000493609 GPR98Q8WXG9 6306 aa1.02□□□□□ -2.25
SMG7-208ENST00000493609 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
SMG7-208ENST00000493609 SYNE1Q8NF91 8797 aaKnown RBP1.01□□□□□ -2.25
SMG7-208ENST00000493609 MT4P47944 62 aa0.94□□□□□ -2.26
SMG7-208ENST00000493609 KRTAP6-2Q3LI66 62 aa0.94□□□□□ -2.26
SMG7-208ENST00000493609 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
SMG7-208ENST00000493609 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
SMG7-208ENST00000493609 MUC5ACP98088 5654 aa0.84□□□□□ -2.28
SMG7-208ENST00000493609 PRM1P04553 51 aa0.72□□□□□ -2.29
SMG7-208ENST00000493609 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
SMG7-208ENST00000493609 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 5.1 ms