RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
CAB39-206ENST00000493540 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
CAB39-206ENST00000493540 MT1MQ8N339 61 aa2.52□□□□□ -2.01
CAB39-206ENST00000493540 MT-ATP8P03928 68 aa2.51□□□□□ -2.01
CAB39-206ENST00000493540 MT4P47944 62 aa2.5□□□□□ -2.01
CAB39-206ENST00000493540 MT1LQ93083 61 aa2.49□□□□□ -2.01
CAB39-206ENST00000493540 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
CAB39-206ENST00000493540 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
CAB39-206ENST00000493540 ACYP2P14621 99 aa2.46□□□□□ -2.02
CAB39-206ENST00000493540 SEC61GP60059 68 aa2.45□□□□□ -2.02
CAB39-206ENST00000493540 SPTSSBQ8NFR3 76 aa2.45□□□□□ -2.02
CAB39-206ENST00000493540 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
CAB39-206ENST00000493540 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
CAB39-206ENST00000493540 A0A0D9SG42 100 aa2.43□□□□□ -2.02
CAB39-206ENST00000493540 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
CAB39-206ENST00000493540 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
CAB39-206ENST00000493540 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
CAB39-206ENST00000493540 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
CAB39-206ENST00000493540 SPANXA2-OT1Q8N9U9 137 aa2.37□□□□□ -2.03
CAB39-206ENST00000493540 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
CAB39-206ENST00000493540 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.03
CAB39-206ENST00000493540 CHKB-CPT1BH3BT56 60 aa2.34□□□□□ -2.03
CAB39-206ENST00000493540 SCGB1A1P11684 91 aa2.33□□□□□ -2.04
CAB39-206ENST00000493540 SMIM20Q8N5G0 67 aa2.33□□□□□ -2.04
CAB39-206ENST00000493540 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CAB39-206ENST00000493540 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
CAB39-206ENST00000493540 SPATA8Q6RVD6 105 aa2.3□□□□□ -2.04
CAB39-206ENST00000493540 SNURFQ9Y675 71 aa2.28□□□□□ -2.04
CAB39-206ENST00000493540 A0A1B0GV90 55 aa2.27□□□□□ -2.05
CAB39-206ENST00000493540 J3QR89 54 aa2.27□□□□□ -2.05
CAB39-206ENST00000493540 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
CAB39-206ENST00000493540 COA5Q86WW8 74 aa2.26□□□□□ -2.05
CAB39-206ENST00000493540 SPINT4Q6UDR6 99 aa2.25□□□□□ -2.05
CAB39-206ENST00000493540 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
CAB39-206ENST00000493540 A0A1B0GU33 70 aa2.24□□□□□ -2.05
CAB39-206ENST00000493540 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
CAB39-206ENST00000493540 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
CAB39-206ENST00000493540 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
CAB39-206ENST00000493540 TNP1P09430 55 aa2.23□□□□□ -2.05
CAB39-206ENST00000493540 SERP2Q8N6R1 65 aa2.2□□□□□ -2.06
CAB39-206ENST00000493540 SERP1Q9Y6X1 66 aa2.2□□□□□ -2.06
CAB39-206ENST00000493540 SMIM26A0A096LP01 95 aa2.17□□□□□ -2.06
CAB39-206ENST00000493540 H7BZZ5 65 aa2.14□□□□□ -2.07
CAB39-206ENST00000493540 K7ERU9 68 aa2.12□□□□□ -2.07
CAB39-206ENST00000493540 MT1AP04731 61 aa2.12□□□□□ -2.07
CAB39-206ENST00000493540 A0A1B0GU69 56 aa2.1□□□□□ -2.07
CAB39-206ENST00000493540 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
CAB39-206ENST00000493540 COX7CP15954 63 aa2.07□□□□□ -2.08
CAB39-206ENST00000493540 KRTAP25-1Q3LHN0 102 aa2.06□□□□□ -2.08
CAB39-206ENST00000493540 V9GYY9 64 aa2.05□□□□□ -2.08
CAB39-206ENST00000493540 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
CAB39-206ENST00000493540 LUZP6Q538Z0 58 aa2□□□□□ -2.09
CAB39-206ENST00000493540 LINC01558Q9Y6Z2 57 aa1.99□□□□□ -2.09
CAB39-206ENST00000493540 PRR15LQ9BU68 103 aa1.98□□□□□ -2.09
CAB39-206ENST00000493540 PSPHP1O15172 72 aa1.97□□□□□ -2.09
CAB39-206ENST00000493540 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
CAB39-206ENST00000493540 UQCR11O14957 56 aa1.93□□□□□ -2.1
CAB39-206ENST00000493540 ATP5EP56381 51 aaPredicted RBP1.91□□□□□ -2.1
CAB39-206ENST00000493540 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
CAB39-206ENST00000493540 MIR22HGQ0VDD5 57 aa1.85□□□□□ -2.11
CAB39-206ENST00000493540 ANAPC13Q9BS18 74 aa1.85□□□□□ -2.11
CAB39-206ENST00000493540 CCDC179H3BU77 68 aa1.84□□□□□ -2.11
CAB39-206ENST00000493540 K7ERS5 55 aa1.78□□□□□ -2.12
CAB39-206ENST00000493540 TMEM258P61165 79 aa1.78□□□□□ -2.12
CAB39-206ENST00000493540 Q1T7F1 81 aa1.74□□□□□ -2.13
CAB39-206ENST00000493540 CDC42SE1Q9NRR8 79 aa1.72□□□□□ -2.13
CAB39-206ENST00000493540 RPS28P62857 69 aaKnown RBP1.71□□□□□ -2.14
CAB39-206ENST00000493540 A6NED7 52 aa1.7□□□□□ -2.14
CAB39-206ENST00000493540 ROMO1P60602 79 aa1.7□□□□□ -2.14
CAB39-206ENST00000493540 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
CAB39-206ENST00000493540 PMAIP1Q13794 54 aa1.64□□□□□ -2.15
CAB39-206ENST00000493540 KTN1-AS1Q86SY8 53 aa1.45□□□□□ -2.18
CAB39-206ENST00000493540 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
CAB39-206ENST00000493540 BRK1Q8WUW1 75 aa1.33□□□□□ -2.2
CAB39-206ENST00000493540 INE1O15225 51 aa1.15□□□□□ -2.23
CAB39-206ENST00000493540 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
CAB39-206ENST00000493540 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
CAB39-206ENST00000493540 PRM1P04553 51 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 38.9 ms