RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
VPS72-205ENST00000491094 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
VPS72-205ENST00000491094 MT1EP04732 61 aa3.76□□□□□ -1.81
VPS72-205ENST00000491094 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
VPS72-205ENST00000491094 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
VPS72-205ENST00000491094 MT1GP13640 62 aa3.72□□□□□ -1.81
VPS72-205ENST00000491094 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
VPS72-205ENST00000491094 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
VPS72-205ENST00000491094 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
VPS72-205ENST00000491094 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
VPS72-205ENST00000491094 MT1MQ8N339 61 aa3.53□□□□□ -1.84
VPS72-205ENST00000491094 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
VPS72-205ENST00000491094 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
VPS72-205ENST00000491094 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
VPS72-205ENST00000491094 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
VPS72-205ENST00000491094 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
VPS72-205ENST00000491094 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
VPS72-205ENST00000491094 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
VPS72-205ENST00000491094 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
VPS72-205ENST00000491094 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
VPS72-205ENST00000491094 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
VPS72-205ENST00000491094 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
VPS72-205ENST00000491094 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
VPS72-205ENST00000491094 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
VPS72-205ENST00000491094 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
VPS72-205ENST00000491094 SPRR2EP22531 72 aa3.2□□□□□ -1.9
VPS72-205ENST00000491094 SPRR2BP35325 72 aa3.2□□□□□ -1.9
VPS72-205ENST00000491094 SPRR2AP35326 72 aa3.2□□□□□ -1.9
VPS72-205ENST00000491094 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
VPS72-205ENST00000491094 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
VPS72-205ENST00000491094 PRM1P04553 51 aa3.15□□□□□ -1.9
VPS72-205ENST00000491094 MT1AP04731 61 aa3.13□□□□□ -1.91
VPS72-205ENST00000491094 SPRR2DP22532 72 aa3.12□□□□□ -1.91
VPS72-205ENST00000491094 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
VPS72-205ENST00000491094 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
VPS72-205ENST00000491094 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
VPS72-205ENST00000491094 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
VPS72-205ENST00000491094 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
VPS72-205ENST00000491094 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
VPS72-205ENST00000491094 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
VPS72-205ENST00000491094 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
VPS72-205ENST00000491094 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
VPS72-205ENST00000491094 MT3P25713 68 aa2.87□□□□□ -1.95
VPS72-205ENST00000491094 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
VPS72-205ENST00000491094 MT4P47944 62 aa2.76□□□□□ -1.97
VPS72-205ENST00000491094 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
VPS72-205ENST00000491094 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
VPS72-205ENST00000491094 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
VPS72-205ENST00000491094 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
VPS72-205ENST00000491094 NEBP20929 6669 aa2.52□□□□□ -2.01
VPS72-205ENST00000491094 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
VPS72-205ENST00000491094 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
VPS72-205ENST00000491094 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
VPS72-205ENST00000491094 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
VPS72-205ENST00000491094 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
VPS72-205ENST00000491094 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
VPS72-205ENST00000491094 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
VPS72-205ENST00000491094 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
VPS72-205ENST00000491094 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.04
VPS72-205ENST00000491094 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
VPS72-205ENST00000491094 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
VPS72-205ENST00000491094 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
VPS72-205ENST00000491094 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
VPS72-205ENST00000491094 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
VPS72-205ENST00000491094 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
VPS72-205ENST00000491094 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
VPS72-205ENST00000491094 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.09
VPS72-205ENST00000491094 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
VPS72-205ENST00000491094 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
VPS72-205ENST00000491094 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
VPS72-205ENST00000491094 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
VPS72-205ENST00000491094 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
VPS72-205ENST00000491094 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
VPS72-205ENST00000491094 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
VPS72-205ENST00000491094 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
VPS72-205ENST00000491094 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
VPS72-205ENST00000491094 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
VPS72-205ENST00000491094 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 86.3 ms