RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 CHKB-CPT1BH3BT56 60 aa3.85□□□□□ -1.79
PTP4A2-206ENST00000489313 PCP4L1A6NKN8 68 aa3.84□□□□□ -1.8
PTP4A2-206ENST00000489313 SCGB1A1P11684 91 aa3.84□□□□□ -1.8
PTP4A2-206ENST00000489313 MT1LQ93083 61 aa3.81□□□□□ -1.8
PTP4A2-206ENST00000489313 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
PTP4A2-206ENST00000489313 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
PTP4A2-206ENST00000489313 SPATA8Q6RVD6 105 aa3.68□□□□□ -1.82
PTP4A2-206ENST00000489313 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
PTP4A2-206ENST00000489313 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
PTP4A2-206ENST00000489313 SNURFQ9Y675 71 aa3.67□□□□□ -1.82
PTP4A2-206ENST00000489313 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
PTP4A2-206ENST00000489313 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
PTP4A2-206ENST00000489313 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
PTP4A2-206ENST00000489313 SMIM20Q8N5G0 67 aa3.63□□□□□ -1.83
PTP4A2-206ENST00000489313 J3QR89 54 aa3.62□□□□□ -1.83
PTP4A2-206ENST00000489313 SEC61GP60059 68 aa3.62□□□□□ -1.83
PTP4A2-206ENST00000489313 SPANXA2-OT1Q8N9U9 137 aa3.62□□□□□ -1.83
PTP4A2-206ENST00000489313 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
PTP4A2-206ENST00000489313 SERP1Q9Y6X1 66 aa3.6□□□□□ -1.83
PTP4A2-206ENST00000489313 A0A1B0GV90 55 aa3.59□□□□□ -1.83
PTP4A2-206ENST00000489313 A0A1B0GU33 70 aa3.59□□□□□ -1.84
PTP4A2-206ENST00000489313 NDUFAF8A1L188 74 aa3.59□□□□□ -1.84
PTP4A2-206ENST00000489313 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
PTP4A2-206ENST00000489313 COA5Q86WW8 74 aa3.57□□□□□ -1.84
PTP4A2-206ENST00000489313 TNP1P09430 55 aa3.55□□□□□ -1.84
PTP4A2-206ENST00000489313 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
PTP4A2-206ENST00000489313 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
PTP4A2-206ENST00000489313 A8MU10 97 aa3.5□□□□□ -1.85
PTP4A2-206ENST00000489313 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
PTP4A2-206ENST00000489313 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
PTP4A2-206ENST00000489313 SMIM26A0A096LP01 95 aa3.46□□□□□ -1.85
PTP4A2-206ENST00000489313 SERP2Q8N6R1 65 aa3.42□□□□□ -1.86
PTP4A2-206ENST00000489313 MT3P25713 68 aa3.4□□□□□ -1.87
PTP4A2-206ENST00000489313 A0A1B0GU69 56 aa3.38□□□□□ -1.87
PTP4A2-206ENST00000489313 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
PTP4A2-206ENST00000489313 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
PTP4A2-206ENST00000489313 K7ERU9 68 aa3.34□□□□□ -1.87
PTP4A2-206ENST00000489313 MUC5ACP98088 5654 aa3.34□□□□□ -1.88
PTP4A2-206ENST00000489313 H7BZZ5 65 aa3.27□□□□□ -1.89
PTP4A2-206ENST00000489313 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
PTP4A2-206ENST00000489313 MT1AP04731 61 aa3.22□□□□□ -1.89
PTP4A2-206ENST00000489313 COX7CP15954 63 aa3.22□□□□□ -1.89
PTP4A2-206ENST00000489313 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
PTP4A2-206ENST00000489313 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
PTP4A2-206ENST00000489313 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
PTP4A2-206ENST00000489313 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
PTP4A2-206ENST00000489313 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
PTP4A2-206ENST00000489313 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
PTP4A2-206ENST00000489313 UQCR11O14957 56 aa3.07□□□□□ -1.92
PTP4A2-206ENST00000489313 V9GYY9 64 aa3.04□□□□□ -1.92
PTP4A2-206ENST00000489313 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
PTP4A2-206ENST00000489313 K7ERS5 55 aa2.96□□□□□ -1.94
PTP4A2-206ENST00000489313 ANAPC13Q9BS18 74 aa2.95□□□□□ -1.94
PTP4A2-206ENST00000489313 ATP5EP56381 51 aaPredicted RBP2.94□□□□□ -1.94
PTP4A2-206ENST00000489313 CCDC179H3BU77 68 aa2.93□□□□□ -1.94
PTP4A2-206ENST00000489313 PSPHP1O15172 72 aa2.89□□□□□ -1.95
PTP4A2-206ENST00000489313 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
PTP4A2-206ENST00000489313 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
PTP4A2-206ENST00000489313 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
PTP4A2-206ENST00000489313 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
PTP4A2-206ENST00000489313 TMEM258P61165 79 aa2.75□□□□□ -1.97
PTP4A2-206ENST00000489313 Q1T7F1 81 aa2.75□□□□□ -1.97
PTP4A2-206ENST00000489313 ROMO1P60602 79 aa2.72□□□□□ -1.97
PTP4A2-206ENST00000489313 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
PTP4A2-206ENST00000489313 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
PTP4A2-206ENST00000489313 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
PTP4A2-206ENST00000489313 A6NED7 52 aa2.64□□□□□ -1.99
PTP4A2-206ENST00000489313 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
PTP4A2-206ENST00000489313 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
PTP4A2-206ENST00000489313 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
PTP4A2-206ENST00000489313 PMAIP1Q13794 54 aa2.31□□□□□ -2.04
PTP4A2-206ENST00000489313 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
PTP4A2-206ENST00000489313 KTN1-AS1Q86SY8 53 aa2.06□□□□□ -2.08
PTP4A2-206ENST00000489313 BRK1Q8WUW1 75 aa1.89□□□□□ -2.11
PTP4A2-206ENST00000489313 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
PTP4A2-206ENST00000489313 INE1O15225 51 aa1.57□□□□□ -2.16
PTP4A2-206ENST00000489313 PRM1P04553 51 aa1.39□□□□□ -2.19
PTP4A2-206ENST00000489313 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms