RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 C5orf42Q9H799 3197 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 MT2AP02795 61 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 AKAP9Q99996 3911 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 CEP295Q9C0D2 2601 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 TEX15Q9BXT5 2789 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 FRYLO94915 3013 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 CFAP54Q96N23 3096 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 DYNC1H1Q14204 4646 aaKnown RBP0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 LAMA2P24043 3122 aaKnown RBP0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 FREM2Q5SZK8 3169 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 HERC1Q15751 4861 aa0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 SPTBN5Q9NRC6 3674 aaKnown RBP0□□□□□ -2.41
HMGB1P36-201ENST00000487709 MT4P47944 62 aa0□□□□□ -2.41
HMGB1P36-201ENST00000487709 KRTAP20-2Q3LI61 65 aa0□□□□□ -2.41
HMGB1P36-201ENST00000487709 MT1MQ8N339 61 aa0□□□□□ -2.41
HMGB1P36-201ENST00000487709 STARD9Q9P2P6 4700 aa0□□□□□ -2.41
HMGB1P36-201ENST00000487709 CFAP46Q8IYW2 2715 aa-0□□□□□ -2.41
HMGB1P36-201ENST00000487709 MUC3AQ02505 3323 aa-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 DCHS1Q96JQ0 3298 aa-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 SRCAPQ6ZRS2 3230 aa-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 MYO15AQ9UKN7 3530 aa-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 MKI67P46013 3256 aaKnown RBP-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 EYSQ5T1H1 3165 aa-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 ATMQ13315 3056 aa-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 ADGRG4Q8IZF6 3080 aa-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 CENPEQ02224 2701 aa-0.01□□□□□ -2.41
HMGB1P36-201ENST00000487709 PCLOQ9Y6V0 5065 aa-0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 PRUNE2Q8WUY3 3088 aa-0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 DSTQ03001 7570 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 PCNTO95613 3336 aa-0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 DNAH12Q6ZR08 3092 aa-0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 DNAH5Q8TE73 4624 aa-0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 KMT2CQ8NEZ4 4911 aaKnown RBP-0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 SPEGQ15772 3267 aa-0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 TRRAPQ9Y4A5 3859 aa-0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 LRBAP50851 2863 aa-0.04□□□□□ -2.42
HMGB1P36-201ENST00000487709 MT1BP07438 61 aa-0.04□□□□□ -2.42
HMGB1P36-201ENST00000487709 CEP350Q5VT06 3117 aa-0.04□□□□□ -2.42
HMGB1P36-201ENST00000487709 ITPR2Q14571 2701 aa-0.04□□□□□ -2.42
HMGB1P36-201ENST00000487709 CENPFP49454 3210 aa-0.04□□□□□ -2.42
HMGB1P36-201ENST00000487709 DNHD1Q96M86 4753 aa-0.05□□□□□ -2.42
HMGB1P36-201ENST00000487709 MT1FP04733 61 aa-0.05□□□□□ -2.42
HMGB1P36-201ENST00000487709 EP400Q96L91 3159 aa-0.06□□□□□ -2.42
HMGB1P36-201ENST00000487709 BOD1L1Q8NFC6 3051 aa-0.06□□□□□ -2.42
HMGB1P36-201ENST00000487709 GOLGB1Q14789 3259 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P36-201ENST00000487709 ASPMQ8IZT6 3477 aa-0.06□□□□□ -2.42
HMGB1P36-201ENST00000487709 SMG1Q96Q15 3661 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P36-201ENST00000487709 BRCA2P51587 3418 aa-0.06□□□□□ -2.42
HMGB1P36-201ENST00000487709 DMDP11532 3685 aa-0.06□□□□□ -2.42
HMGB1P36-201ENST00000487709 MUC2Q02817 5179 aa-0.06□□□□□ -2.42
HMGB1P36-201ENST00000487709 MUC12Q9UKN1 5478 aa-0.07□□□□□ -2.42
HMGB1P36-201ENST00000487709 RYR1P21817 5038 aa-0.07□□□□□ -2.42
HMGB1P36-201ENST00000487709 CFAP47Q6ZTR5 3102 aa-0.07□□□□□ -2.42
HMGB1P36-201ENST00000487709 USH2AO75445 5202 aa-0.08□□□□□ -2.42
HMGB1P36-201ENST00000487709 VCANP13611 3396 aa-0.08□□□□□ -2.42
HMGB1P36-201ENST00000487709 VPS13CQ709C8 3753 aa-0.08□□□□□ -2.42
HMGB1P36-201ENST00000487709 USP34Q70CQ2 3546 aa-0.08□□□□□ -2.42
HMGB1P36-201ENST00000487709 UTRNP46939 3433 aa-0.09□□□□□ -2.42
HMGB1P36-201ENST00000487709 VPS13AQ96RL7 3174 aa-0.09□□□□□ -2.42
HMGB1P36-201ENST00000487709 UBR4Q5T4S7 5183 aa-0.09□□□□□ -2.42
HMGB1P36-201ENST00000487709 WDFY3Q8IZQ1 3526 aa-0.09□□□□□ -2.42
HMGB1P36-201ENST00000487709 BIRC6Q9NR09 4857 aa-0.09□□□□□ -2.42
HMGB1P36-201ENST00000487709 UNC80Q8N2C7 3258 aa-0.1□□□□□ -2.43
HMGB1P36-201ENST00000487709 RYR3Q15413 4870 aa-0.1□□□□□ -2.43
HMGB1P36-201ENST00000487709 HERC2O95714 4834 aa-0.11□□□□□ -2.43
HMGB1P36-201ENST00000487709 CDH23Q9H251 3354 aa-0.12□□□□□ -2.43
HMGB1P36-201ENST00000487709 KRTAP19-2Q3LHN2 52 aa-0.13□□□□□ -2.43
HMGB1P36-201ENST00000487709 RNF213Q63HN8 5207 aa-0.13□□□□□ -2.43
HMGB1P36-201ENST00000487709 KIAA1109Q2LD37 5005 aa-0.13□□□□□ -2.43
HMGB1P36-201ENST00000487709 RYR2Q92736 4967 aa-0.14□□□□□ -2.43
HMGB1P36-201ENST00000487709 KRTAP20-1Q3LI63 56 aa-0.14□□□□□ -2.43
HMGB1P36-201ENST00000487709 HYDINQ4G0P3 5121 aa-0.15□□□□□ -2.43
HMGB1P36-201ENST00000487709 NEBP20929 6669 aa-0.15□□□□□ -2.43
HMGB1P36-201ENST00000487709 EPPK1P58107 5090 aaKnown RBP-0.16□□□□□ -2.43
HMGB1P36-201ENST00000487709 DNAH14Q0VDD8 3507 aa-0.18□□□□□ -2.44
HMGB1P36-201ENST00000487709 KRTAP19-6Q3LI70 58 aa-0.18□□□□□ -2.44
HMGB1P36-201ENST00000487709 ABCA13Q86UQ4 5058 aa-0.21□□□□□ -2.44
Retrieved 77 of 20,778 RNA–protein pairs in 278 ms