RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
RTN4-213ENST00000485749 MYCBP2O75592 4640 aa1.51□□□□□ -2.17
RTN4-213ENST00000485749 DNHD1Q96M86 4753 aa1.5□□□□□ -2.17
RTN4-213ENST00000485749 KRTAP19-2Q3LHN2 52 aa1.45□□□□□ -2.18
RTN4-213ENST00000485749 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
RTN4-213ENST00000485749 RYR2Q92736 4967 aa1.44□□□□□ -2.18
RTN4-213ENST00000485749 SPRR2GQ9BYE4 73 aa1.44□□□□□ -2.18
RTN4-213ENST00000485749 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
RTN4-213ENST00000485749 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
RTN4-213ENST00000485749 RYR1P21817 5038 aa1.41□□□□□ -2.18
RTN4-213ENST00000485749 LPAP08519 4548 aa1.4□□□□□ -2.19
RTN4-213ENST00000485749 LRP2P98164 4655 aa1.38□□□□□ -2.19
RTN4-213ENST00000485749 KMT2CQ8NEZ4 4911 aaKnown RBP1.38□□□□□ -2.19
RTN4-213ENST00000485749 MUC17Q685J3 4493 aa1.38□□□□□ -2.19
RTN4-213ENST00000485749 HERC1Q15751 4861 aa1.38□□□□□ -2.19
RTN4-213ENST00000485749 KRTAP19-8Q3LI54 63 aa1.35□□□□□ -2.19
RTN4-213ENST00000485749 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.19
RTN4-213ENST00000485749 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.19
RTN4-213ENST00000485749 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.19
RTN4-213ENST00000485749 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.19
RTN4-213ENST00000485749 RYR3Q15413 4870 aa1.34□□□□□ -2.2
RTN4-213ENST00000485749 KIAA1109Q2LD37 5005 aa1.33□□□□□ -2.2
RTN4-213ENST00000485749 MT2AP02795 61 aa1.32□□□□□ -2.2
RTN4-213ENST00000485749 MT1XP80297 61 aa1.32□□□□□ -2.2
RTN4-213ENST00000485749 MT1FP04733 61 aa1.31□□□□□ -2.2
RTN4-213ENST00000485749 MT1HP80294 61 aa1.31□□□□□ -2.2
RTN4-213ENST00000485749 FLGP20930 4061 aaPredicted RBP1.3□□□□□ -2.2
RTN4-213ENST00000485749 MT1BP07438 61 aa1.29□□□□□ -2.2
RTN4-213ENST00000485749 ABCA13Q86UQ4 5058 aa1.29□□□□□ -2.2
RTN4-213ENST00000485749 BIRC6Q9NR09 4857 aa1.28□□□□□ -2.21
RTN4-213ENST00000485749 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
RTN4-213ENST00000485749 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
RTN4-213ENST00000485749 KRTAP19-5Q3LI72 72 aa1.25□□□□□ -2.21
RTN4-213ENST00000485749 HERC2O95714 4834 aa1.23□□□□□ -2.21
RTN4-213ENST00000485749 PRM1P04553 51 aa1.23□□□□□ -2.21
RTN4-213ENST00000485749 HMCN2Q8NDA2 5059 aa1.22□□□□□ -2.21
RTN4-213ENST00000485749 UBR4Q5T4S7 5183 aa1.22□□□□□ -2.21
RTN4-213ENST00000485749 PCLOQ9Y6V0 5065 aa1.21□□□□□ -2.22
RTN4-213ENST00000485749 EPPK1P58107 5090 aaKnown RBP1.21□□□□□ -2.22
RTN4-213ENST00000485749 MUC2Q02817 5179 aa1.17□□□□□ -2.22
RTN4-213ENST00000485749 KRTAP19-7Q3SYF9 63 aa1.16□□□□□ -2.22
RTN4-213ENST00000485749 MT1EP04732 61 aa1.15□□□□□ -2.23
RTN4-213ENST00000485749 MT1LQ93083 61 aa1.15□□□□□ -2.23
RTN4-213ENST00000485749 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
RTN4-213ENST00000485749 FAT4Q6V0I7 4981 aa1.14□□□□□ -2.23
RTN4-213ENST00000485749 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
RTN4-213ENST00000485749 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
RTN4-213ENST00000485749 RNF213Q63HN8 5207 aa1.11□□□□□ -2.23
RTN4-213ENST00000485749 MT1GP13640 62 aa1.09□□□□□ -2.23
RTN4-213ENST00000485749 MT1AP04731 61 aa1.07□□□□□ -2.24
RTN4-213ENST00000485749 MT1MQ8N339 61 aa1.06□□□□□ -2.24
RTN4-213ENST00000485749 SPRR2DP22532 72 aa1.05□□□□□ -2.24
RTN4-213ENST00000485749 KRTAP19-6Q3LI70 58 aa1.05□□□□□ -2.24
RTN4-213ENST00000485749 SPRR2BP35325 72 aa1.03□□□□□ -2.24
RTN4-213ENST00000485749 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.25
RTN4-213ENST00000485749 SPRR2AP35326 72 aa0.99□□□□□ -2.25
RTN4-213ENST00000485749 SPRR2FQ96RM1 72 aa0.98□□□□□ -2.25
RTN4-213ENST00000485749 USH2AO75445 5202 aa0.98□□□□□ -2.25
RTN4-213ENST00000485749 NEBP20929 6669 aa0.98□□□□□ -2.25
RTN4-213ENST00000485749 SYNE2Q8WXH0 6885 aaKnown RBP0.97□□□□□ -2.25
RTN4-213ENST00000485749 KMT2DO14686 5537 aa0.97□□□□□ -2.25
RTN4-213ENST00000485749 DSTQ03001 7570 aaKnown RBP0.97□□□□□ -2.25
RTN4-213ENST00000485749 SSPOA2VEC9 5147 aa0.97□□□□□ -2.25
RTN4-213ENST00000485749 KRTAP20-1Q3LI63 56 aa0.96□□□□□ -2.26
RTN4-213ENST00000485749 KRTAP6-1Q3LI64 71 aa0.95□□□□□ -2.26
RTN4-213ENST00000485749 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
RTN4-213ENST00000485749 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
RTN4-213ENST00000485749 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
RTN4-213ENST00000485749 SPRR2EP22531 72 aa0.88□□□□□ -2.27
RTN4-213ENST00000485749 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
RTN4-213ENST00000485749 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
RTN4-213ENST00000485749 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
RTN4-213ENST00000485749 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
RTN4-213ENST00000485749 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
RTN4-213ENST00000485749 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
RTN4-213ENST00000485749 KRTAP20-2Q3LI61 65 aa0.71□□□□□ -2.3
RTN4-213ENST00000485749 MT4P47944 62 aa0.69□□□□□ -2.3
RTN4-213ENST00000485749 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 31.2 ms