RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
SMARCC1-206ENST00000485737 EPPK1P58107 5090 aaKnown RBP1.98□□□□□ -2.09
SMARCC1-206ENST00000485737 SPRR2GQ9BYE4 73 aa1.96□□□□□ -2.1
SMARCC1-206ENST00000485737 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
SMARCC1-206ENST00000485737 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
SMARCC1-206ENST00000485737 PRO2289Q9P1D8 64 aa1.91□□□□□ -2.1
SMARCC1-206ENST00000485737 HERC2O95714 4834 aa1.91□□□□□ -2.1
SMARCC1-206ENST00000485737 INE1O15225 51 aa1.9□□□□□ -2.11
SMARCC1-206ENST00000485737 HMCN2Q8NDA2 5059 aa1.88□□□□□ -2.11
SMARCC1-206ENST00000485737 PCLOQ9Y6V0 5065 aa1.88□□□□□ -2.11
SMARCC1-206ENST00000485737 KRTAP19-8Q3LI54 63 aa1.87□□□□□ -2.11
SMARCC1-206ENST00000485737 MT2AP02795 61 aa1.85□□□□□ -2.11
SMARCC1-206ENST00000485737 MT1FP04733 61 aa1.84□□□□□ -2.11
SMARCC1-206ENST00000485737 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
SMARCC1-206ENST00000485737 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
SMARCC1-206ENST00000485737 MT1HP80294 61 aa1.83□□□□□ -2.12
SMARCC1-206ENST00000485737 MUC2Q02817 5179 aa1.82□□□□□ -2.12
SMARCC1-206ENST00000485737 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
SMARCC1-206ENST00000485737 MT1XP80297 61 aa1.82□□□□□ -2.12
SMARCC1-206ENST00000485737 MT1BP07438 61 aa1.81□□□□□ -2.12
SMARCC1-206ENST00000485737 KRTAP10-10P60014 251 aa1.79□□□□□ -2.12
SMARCC1-206ENST00000485737 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
SMARCC1-206ENST00000485737 M0R2T5 61 aa1.78□□□□□ -2.12
SMARCC1-206ENST00000485737 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
SMARCC1-206ENST00000485737 RNF213Q63HN8 5207 aa1.78□□□□□ -2.13
SMARCC1-206ENST00000485737 UBR4Q5T4S7 5183 aa1.77□□□□□ -2.13
SMARCC1-206ENST00000485737 KRTAP19-5Q3LI72 72 aa1.7□□□□□ -2.14
SMARCC1-206ENST00000485737 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
SMARCC1-206ENST00000485737 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
SMARCC1-206ENST00000485737 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
SMARCC1-206ENST00000485737 KRTAP2-1Q9BYU5 128 aa1.68□□□□□ -2.14
SMARCC1-206ENST00000485737 KRTAP19-7Q3SYF9 63 aa1.63□□□□□ -2.15
SMARCC1-206ENST00000485737 MT1LQ93083 61 aa1.59□□□□□ -2.15
SMARCC1-206ENST00000485737 MT1EP04732 61 aa1.58□□□□□ -2.16
SMARCC1-206ENST00000485737 USH2AO75445 5202 aa1.54□□□□□ -2.16
SMARCC1-206ENST00000485737 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
SMARCC1-206ENST00000485737 KMT2DO14686 5537 aa1.5□□□□□ -2.17
SMARCC1-206ENST00000485737 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
SMARCC1-206ENST00000485737 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
SMARCC1-206ENST00000485737 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
SMARCC1-206ENST00000485737 MT1MQ8N339 61 aa1.47□□□□□ -2.17
SMARCC1-206ENST00000485737 MT1GP13640 62 aa1.45□□□□□ -2.18
SMARCC1-206ENST00000485737 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
SMARCC1-206ENST00000485737 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
SMARCC1-206ENST00000485737 MT1AP04731 61 aa1.41□□□□□ -2.18
SMARCC1-206ENST00000485737 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
SMARCC1-206ENST00000485737 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
SMARCC1-206ENST00000485737 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
SMARCC1-206ENST00000485737 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
SMARCC1-206ENST00000485737 MUC12Q9UKN1 5478 aa1.31□□□□□ -2.2
SMARCC1-206ENST00000485737 PRM1P04553 51 aa1.3□□□□□ -2.2
SMARCC1-206ENST00000485737 SPRR2FQ96RM1 72 aa1.3□□□□□ -2.2
SMARCC1-206ENST00000485737 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
SMARCC1-206ENST00000485737 KRTAP6-2Q3LI66 62 aa1.24□□□□□ -2.21
SMARCC1-206ENST00000485737 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
SMARCC1-206ENST00000485737 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
SMARCC1-206ENST00000485737 SPRR2AP35326 72 aa1.2□□□□□ -2.22
SMARCC1-206ENST00000485737 KRTAP6-3Q3LI67 103 aa1.2□□□□□ -2.22
SMARCC1-206ENST00000485737 SPRR2EP22531 72 aa1.16□□□□□ -2.22
SMARCC1-206ENST00000485737 SPRR2BP35325 72 aa1.16□□□□□ -2.22
SMARCC1-206ENST00000485737 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
SMARCC1-206ENST00000485737 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
SMARCC1-206ENST00000485737 SPRR2DP22532 72 aa1.11□□□□□ -2.23
SMARCC1-206ENST00000485737 SYNE2Q8WXH0 6885 aaKnown RBP1.09□□□□□ -2.24
SMARCC1-206ENST00000485737 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
SMARCC1-206ENST00000485737 NEBP20929 6669 aa1.01□□□□□ -2.25
SMARCC1-206ENST00000485737 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
SMARCC1-206ENST00000485737 MUC5ACP98088 5654 aa1□□□□□ -2.25
SMARCC1-206ENST00000485737 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
SMARCC1-206ENST00000485737 MT4P47944 62 aa0.95□□□□□ -2.26
SMARCC1-206ENST00000485737 KRTAP20-1Q3LI63 56 aa0.95□□□□□ -2.26
SMARCC1-206ENST00000485737 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
SMARCC1-206ENST00000485737 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
SMARCC1-206ENST00000485737 GPR98Q8WXG9 6306 aa0.81□□□□□ -2.28
SMARCC1-206ENST00000485737 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
SMARCC1-206ENST00000485737 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
SMARCC1-206ENST00000485737 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
SMARCC1-206ENST00000485737 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 62.2 ms