RNA–Protein interactions for RNA: ENST00000485155.1

MDH1-212, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-212ENST00000485155 FAT2Q9NYQ8 4349 aa1.48□□□□□ -2.17
MDH1-212ENST00000485155 TNXBP22105 4242 aa1.47□□□□□ -2.17
MDH1-212ENST00000485155 PLECQ15149 4684 aaKnown RBP1.47□□□□□ -2.17
MDH1-212ENST00000485155 VPS13BQ7Z7G8 4022 aa1.46□□□□□ -2.18
MDH1-212ENST00000485155 KRTAP4-1Q9BYQ7 146 aa1.46□□□□□ -2.18
MDH1-212ENST00000485155 FAT3Q8TDW7 4589 aa1.45□□□□□ -2.18
MDH1-212ENST00000485155 KRTAP19-2Q3LHN2 52 aa1.42□□□□□ -2.18
MDH1-212ENST00000485155 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
MDH1-212ENST00000485155 MT1HL1P0DM35 61 aa1.41□□□□□ -2.18
MDH1-212ENST00000485155 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
MDH1-212ENST00000485155 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
MDH1-212ENST00000485155 FAT1Q14517 4588 aa1.37□□□□□ -2.19
MDH1-212ENST00000485155 MT1AP04731 61 aa1.34□□□□□ -2.19
MDH1-212ENST00000485155 MT1XP80297 61 aa1.34□□□□□ -2.19
MDH1-212ENST00000485155 HERC1Q15751 4861 aa1.34□□□□□ -2.2
MDH1-212ENST00000485155 MT1EP04732 61 aa1.32□□□□□ -2.2
MDH1-212ENST00000485155 LPAP08519 4548 aa1.32□□□□□ -2.2
MDH1-212ENST00000485155 MT1LQ93083 61 aa1.29□□□□□ -2.2
MDH1-212ENST00000485155 DNHD1Q96M86 4753 aa1.28□□□□□ -2.2
MDH1-212ENST00000485155 FCGBPQ9Y6R7 5405 aaPredicted RBP1.27□□□□□ -2.21
MDH1-212ENST00000485155 MT1BP07438 61 aa1.26□□□□□ -2.21
MDH1-212ENST00000485155 MUC17Q685J3 4493 aa1.26□□□□□ -2.21
MDH1-212ENST00000485155 PRM1P04553 51 aa1.25□□□□□ -2.21
MDH1-212ENST00000485155 MT2AP02795 61 aa1.21□□□□□ -2.22
MDH1-212ENST00000485155 LRP2P98164 4655 aa1.19□□□□□ -2.22
MDH1-212ENST00000485155 MT1FP04733 61 aa1.19□□□□□ -2.22
MDH1-212ENST00000485155 SPRR2AP35326 72 aa1.19□□□□□ -2.22
MDH1-212ENST00000485155 KRTAP19-7Q3SYF9 63 aa1.19□□□□□ -2.22
MDH1-212ENST00000485155 SPRR2FQ96RM1 72 aa1.18□□□□□ -2.22
MDH1-212ENST00000485155 HMCN2Q8NDA2 5059 aa1.17□□□□□ -2.22
MDH1-212ENST00000485155 SPRR2BP35325 72 aa1.17□□□□□ -2.22
MDH1-212ENST00000485155 MT1HP80294 61 aa1.17□□□□□ -2.22
MDH1-212ENST00000485155 MT1GP13640 62 aa1.12□□□□□ -2.23
MDH1-212ENST00000485155 SPRR2DP22532 72 aa1.12□□□□□ -2.23
MDH1-212ENST00000485155 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
MDH1-212ENST00000485155 RYR2Q92736 4967 aa1.11□□□□□ -2.23
MDH1-212ENST00000485155 HYDINQ4G0P3 5121 aa1.11□□□□□ -2.23
MDH1-212ENST00000485155 KMT2CQ8NEZ4 4911 aaKnown RBP1.1□□□□□ -2.23
MDH1-212ENST00000485155 SPRR2EP22531 72 aa1.1□□□□□ -2.23
MDH1-212ENST00000485155 MUC2Q02817 5179 aa1.08□□□□□ -2.24
MDH1-212ENST00000485155 MT1MQ8N339 61 aa1.08□□□□□ -2.24
MDH1-212ENST00000485155 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
MDH1-212ENST00000485155 RYR3Q15413 4870 aa1.05□□□□□ -2.24
MDH1-212ENST00000485155 RYR1P21817 5038 aa1.04□□□□□ -2.24
MDH1-212ENST00000485155 HERC2O95714 4834 aa1.03□□□□□ -2.24
MDH1-212ENST00000485155 SYNE1Q8NF91 8797 aaKnown RBP0.98□□□□□ -2.25
MDH1-212ENST00000485155 BIRC6Q9NR09 4857 aa0.98□□□□□ -2.25
MDH1-212ENST00000485155 UBR4Q5T4S7 5183 aa0.97□□□□□ -2.25
MDH1-212ENST00000485155 KRTAP6-1Q3LI64 71 aa0.96□□□□□ -2.26
MDH1-212ENST00000485155 PCLOQ9Y6V0 5065 aa0.94□□□□□ -2.26
MDH1-212ENST00000485155 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
MDH1-212ENST00000485155 ABCA13Q86UQ4 5058 aa0.9□□□□□ -2.27
MDH1-212ENST00000485155 KRTAP19-6Q3LI70 58 aa0.87□□□□□ -2.27
MDH1-212ENST00000485155 EPPK1P58107 5090 aaKnown RBP0.87□□□□□ -2.27
MDH1-212ENST00000485155 KIAA1109Q2LD37 5005 aa0.86□□□□□ -2.27
MDH1-212ENST00000485155 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
MDH1-212ENST00000485155 USH2AO75445 5202 aa0.85□□□□□ -2.27
MDH1-212ENST00000485155 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.28
MDH1-212ENST00000485155 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
MDH1-212ENST00000485155 RNF213Q63HN8 5207 aa0.81□□□□□ -2.28
MDH1-212ENST00000485155 SSPOA2VEC9 5147 aa0.79□□□□□ -2.28
MDH1-212ENST00000485155 KMT2DO14686 5537 aa0.73□□□□□ -2.29
MDH1-212ENST00000485155 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
MDH1-212ENST00000485155 MDN1Q9NU22 5596 aa0.71□□□□□ -2.3
MDH1-212ENST00000485155 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
MDH1-212ENST00000485155 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
MDH1-212ENST00000485155 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.32
MDH1-212ENST00000485155 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
MDH1-212ENST00000485155 MUC12Q9UKN1 5478 aa0.58□□□□□ -2.32
MDH1-212ENST00000485155 KRTAP20-2Q3LI61 65 aa0.57□□□□□ -2.32
MDH1-212ENST00000485155 KRTAP20-1Q3LI63 56 aa0.52□□□□□ -2.33
MDH1-212ENST00000485155 GPR98Q8WXG9 6306 aa0.5□□□□□ -2.33
MDH1-212ENST00000485155 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
MDH1-212ENST00000485155 SYNE2Q8WXH0 6885 aaKnown RBP0.45□□□□□ -2.34
MDH1-212ENST00000485155 MT4P47944 62 aa0.43□□□□□ -2.34
MDH1-212ENST00000485155 FSIP2Q5CZC0 6907 aa0.41□□□□□ -2.34
MDH1-212ENST00000485155 MACF1Q9UPN3 7388 aaKnown RBP0.35□□□□□ -2.35
MDH1-212ENST00000485155 NEBP20929 6669 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms