RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 TNP1P09430 55 aa1.8□□□□□ -2.12
LTN1-205ENST00000483326 KRTAP10-4P60372 401 aaPredicted RBP1.8□□□□□ -2.12
LTN1-205ENST00000483326 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
LTN1-205ENST00000483326 TNXBP22105 4242 aa1.79□□□□□ -2.12
LTN1-205ENST00000483326 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
LTN1-205ENST00000483326 MT1HL1P0DM35 61 aa1.75□□□□□ -2.13
LTN1-205ENST00000483326 HMCN2Q8NDA2 5059 aa1.74□□□□□ -2.13
LTN1-205ENST00000483326 KRTAP10-10P60014 251 aa1.73□□□□□ -2.13
LTN1-205ENST00000483326 LRP2P98164 4655 aa1.71□□□□□ -2.14
LTN1-205ENST00000483326 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
LTN1-205ENST00000483326 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
LTN1-205ENST00000483326 RNF213Q63HN8 5207 aa1.66□□□□□ -2.14
LTN1-205ENST00000483326 LPAP08519 4548 aa1.65□□□□□ -2.15
LTN1-205ENST00000483326 MUC17Q685J3 4493 aa1.63□□□□□ -2.15
LTN1-205ENST00000483326 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.15
LTN1-205ENST00000483326 MUC2Q02817 5179 aa1.58□□□□□ -2.16
LTN1-205ENST00000483326 FLGP20930 4061 aaPredicted RBP1.57□□□□□ -2.16
LTN1-205ENST00000483326 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
LTN1-205ENST00000483326 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
LTN1-205ENST00000483326 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
LTN1-205ENST00000483326 M0R2T5 61 aa1.52□□□□□ -2.17
LTN1-205ENST00000483326 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
LTN1-205ENST00000483326 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
LTN1-205ENST00000483326 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
LTN1-205ENST00000483326 MT1HP80294 61 aa1.49□□□□□ -2.17
LTN1-205ENST00000483326 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
LTN1-205ENST00000483326 KRTAP2-3P0C7H8 128 aa1.45□□□□□ -2.18
LTN1-205ENST00000483326 KRTAP2-4Q9BYR9 128 aa1.45□□□□□ -2.18
LTN1-205ENST00000483326 KRTAP2-1Q9BYU5 128 aa1.45□□□□□ -2.18
LTN1-205ENST00000483326 FSIP2Q5CZC0 6907 aa1.44□□□□□ -2.18
LTN1-205ENST00000483326 CRCT1Q9UGL9 99 aa1.44□□□□□ -2.18
LTN1-205ENST00000483326 SPRR2GQ9BYE4 73 aa1.4□□□□□ -2.19
LTN1-205ENST00000483326 MT2AP02795 61 aa1.39□□□□□ -2.19
LTN1-205ENST00000483326 USH2AO75445 5202 aa1.37□□□□□ -2.19
LTN1-205ENST00000483326 MT1FP04733 61 aa1.36□□□□□ -2.19
LTN1-205ENST00000483326 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
LTN1-205ENST00000483326 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.2
LTN1-205ENST00000483326 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
LTN1-205ENST00000483326 KRTAP19-6Q3LI70 58 aa1.33□□□□□ -2.2
LTN1-205ENST00000483326 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
LTN1-205ENST00000483326 GPR98Q8WXG9 6306 aa1.3□□□□□ -2.2
LTN1-205ENST00000483326 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
LTN1-205ENST00000483326 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
LTN1-205ENST00000483326 KRTAP19-5Q3LI72 72 aa1.28□□□□□ -2.2
LTN1-205ENST00000483326 MT1BP07438 61 aa1.26□□□□□ -2.21
LTN1-205ENST00000483326 MT1XP80297 61 aa1.25□□□□□ -2.21
LTN1-205ENST00000483326 NEBP20929 6669 aa1.24□□□□□ -2.21
LTN1-205ENST00000483326 PRM1P04553 51 aa1.23□□□□□ -2.21
LTN1-205ENST00000483326 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
LTN1-205ENST00000483326 MT1AP04731 61 aa1.21□□□□□ -2.22
LTN1-205ENST00000483326 MT1EP04732 61 aa1.19□□□□□ -2.22
LTN1-205ENST00000483326 MDN1Q9NU22 5596 aa1.19□□□□□ -2.22
LTN1-205ENST00000483326 KMT2DO14686 5537 aa1.18□□□□□ -2.22
LTN1-205ENST00000483326 MT1LQ93083 61 aa1.18□□□□□ -2.22
LTN1-205ENST00000483326 KRTAP20-1Q3LI63 56 aa1.16□□□□□ -2.22
LTN1-205ENST00000483326 SPRR2FQ96RM1 72 aa1.16□□□□□ -2.22
LTN1-205ENST00000483326 SPRR2EP22531 72 aa1.15□□□□□ -2.23
LTN1-205ENST00000483326 SPRR2BP35325 72 aa1.15□□□□□ -2.23
LTN1-205ENST00000483326 SPRR2AP35326 72 aa1.15□□□□□ -2.23
LTN1-205ENST00000483326 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
LTN1-205ENST00000483326 SPRR2DP22532 72 aa1.11□□□□□ -2.23
LTN1-205ENST00000483326 KRTAP19-7Q3SYF9 63 aa1.1□□□□□ -2.23
LTN1-205ENST00000483326 KRTAP6-2Q3LI66 62 aa1.07□□□□□ -2.24
LTN1-205ENST00000483326 MT1GP13640 62 aa1.06□□□□□ -2.24
LTN1-205ENST00000483326 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
LTN1-205ENST00000483326 DSTQ03001 7570 aaKnown RBP1.04□□□□□ -2.24
LTN1-205ENST00000483326 SYNE1Q8NF91 8797 aaKnown RBP1.02□□□□□ -2.25
LTN1-205ENST00000483326 MT1MQ8N339 61 aa1.01□□□□□ -2.25
LTN1-205ENST00000483326 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
LTN1-205ENST00000483326 MT4P47944 62 aa0.96□□□□□ -2.26
LTN1-205ENST00000483326 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
LTN1-205ENST00000483326 KRTAP6-1Q3LI64 71 aa0.93□□□□□ -2.26
LTN1-205ENST00000483326 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
LTN1-205ENST00000483326 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
LTN1-205ENST00000483326 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
LTN1-205ENST00000483326 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
LTN1-205ENST00000483326 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
LTN1-205ENST00000483326 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 198.4 ms