RNA–Protein interactions for RNA: ENST00000483235.5

STAG1-207, Transcript of stromal antigen 1, humanhuman

TSL 1 (best)

Gene STAG1, Length 5,206 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-207ENST00000483235 TNXBP22105 4242 aa3.27□□□□□ -1.89
STAG1-207ENST00000483235 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
STAG1-207ENST00000483235 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
STAG1-207ENST00000483235 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
STAG1-207ENST00000483235 MT3P25713 68 aa3.23□□□□□ -1.89
STAG1-207ENST00000483235 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
STAG1-207ENST00000483235 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
STAG1-207ENST00000483235 LPAP08519 4548 aa3.21□□□□□ -1.9
STAG1-207ENST00000483235 HMCN2Q8NDA2 5059 aa3.21□□□□□ -1.9
STAG1-207ENST00000483235 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
STAG1-207ENST00000483235 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
STAG1-207ENST00000483235 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
STAG1-207ENST00000483235 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
STAG1-207ENST00000483235 MT1AP04731 61 aa3.11□□□□□ -1.91
STAG1-207ENST00000483235 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
STAG1-207ENST00000483235 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
STAG1-207ENST00000483235 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
STAG1-207ENST00000483235 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.05□□□□□ -1.92
STAG1-207ENST00000483235 MT4P47944 62 aa3.03□□□□□ -1.93
STAG1-207ENST00000483235 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
STAG1-207ENST00000483235 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
STAG1-207ENST00000483235 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
STAG1-207ENST00000483235 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
STAG1-207ENST00000483235 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
STAG1-207ENST00000483235 MUC2Q02817 5179 aa2.96□□□□□ -1.94
STAG1-207ENST00000483235 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
STAG1-207ENST00000483235 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
STAG1-207ENST00000483235 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
STAG1-207ENST00000483235 LCE1DQ5T752 114 aa2.84□□□□□ -1.95
STAG1-207ENST00000483235 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.95
STAG1-207ENST00000483235 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
STAG1-207ENST00000483235 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
STAG1-207ENST00000483235 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
STAG1-207ENST00000483235 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
STAG1-207ENST00000483235 USH2AO75445 5202 aa2.77□□□□□ -1.97
STAG1-207ENST00000483235 PRM1P04553 51 aa2.74□□□□□ -1.97
STAG1-207ENST00000483235 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
STAG1-207ENST00000483235 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
STAG1-207ENST00000483235 KRTAP4-9Q9BYQ8 210 aa2.64□□□□□ -1.99
STAG1-207ENST00000483235 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
STAG1-207ENST00000483235 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
STAG1-207ENST00000483235 NEBP20929 6669 aa2.58□□□□□ -2
STAG1-207ENST00000483235 MACF1Q9UPN3 7388 aaKnown RBP2.57□□□□□ -2
STAG1-207ENST00000483235 KMT2DO14686 5537 aa2.53□□□□□ -2
STAG1-207ENST00000483235 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
STAG1-207ENST00000483235 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
STAG1-207ENST00000483235 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
STAG1-207ENST00000483235 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
STAG1-207ENST00000483235 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
STAG1-207ENST00000483235 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
STAG1-207ENST00000483235 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
STAG1-207ENST00000483235 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
STAG1-207ENST00000483235 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
STAG1-207ENST00000483235 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
STAG1-207ENST00000483235 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
STAG1-207ENST00000483235 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
STAG1-207ENST00000483235 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
STAG1-207ENST00000483235 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
STAG1-207ENST00000483235 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
STAG1-207ENST00000483235 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
STAG1-207ENST00000483235 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
STAG1-207ENST00000483235 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
STAG1-207ENST00000483235 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
STAG1-207ENST00000483235 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
STAG1-207ENST00000483235 KRTAP4-2Q9BYR5 136 aa1.91□□□□□ -2.1
STAG1-207ENST00000483235 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
STAG1-207ENST00000483235 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
STAG1-207ENST00000483235 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
STAG1-207ENST00000483235 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
STAG1-207ENST00000483235 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
STAG1-207ENST00000483235 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
STAG1-207ENST00000483235 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
STAG1-207ENST00000483235 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
STAG1-207ENST00000483235 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
STAG1-207ENST00000483235 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
STAG1-207ENST00000483235 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
STAG1-207ENST00000483235 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
STAG1-207ENST00000483235 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms