RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
RAPGEF3-210ENST00000482843 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.74
RAPGEF3-210ENST00000482843 MT1EP04732 61 aa4.14□□□□□ -1.75
RAPGEF3-210ENST00000482843 MT1LQ93083 61 aa4.14□□□□□ -1.75
RAPGEF3-210ENST00000482843 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
RAPGEF3-210ENST00000482843 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
RAPGEF3-210ENST00000482843 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
RAPGEF3-210ENST00000482843 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
RAPGEF3-210ENST00000482843 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
RAPGEF3-210ENST00000482843 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
RAPGEF3-210ENST00000482843 MT1GP13640 62 aa4.03□□□□□ -1.76
RAPGEF3-210ENST00000482843 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
RAPGEF3-210ENST00000482843 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
RAPGEF3-210ENST00000482843 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
RAPGEF3-210ENST00000482843 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
RAPGEF3-210ENST00000482843 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
RAPGEF3-210ENST00000482843 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
RAPGEF3-210ENST00000482843 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
RAPGEF3-210ENST00000482843 MT1MQ8N339 61 aa3.91□□□□□ -1.78
RAPGEF3-210ENST00000482843 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
RAPGEF3-210ENST00000482843 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
RAPGEF3-210ENST00000482843 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
RAPGEF3-210ENST00000482843 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
RAPGEF3-210ENST00000482843 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
RAPGEF3-210ENST00000482843 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
RAPGEF3-210ENST00000482843 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
RAPGEF3-210ENST00000482843 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
RAPGEF3-210ENST00000482843 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
RAPGEF3-210ENST00000482843 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
RAPGEF3-210ENST00000482843 SPRR2EP22531 72 aa3.69□□□□□ -1.82
RAPGEF3-210ENST00000482843 SPRR2BP35325 72 aa3.69□□□□□ -1.82
RAPGEF3-210ENST00000482843 SPRR2AP35326 72 aa3.69□□□□□ -1.82
RAPGEF3-210ENST00000482843 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
RAPGEF3-210ENST00000482843 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
RAPGEF3-210ENST00000482843 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
RAPGEF3-210ENST00000482843 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
RAPGEF3-210ENST00000482843 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
RAPGEF3-210ENST00000482843 PRM1P04553 51 aa3.55□□□□□ -1.84
RAPGEF3-210ENST00000482843 SPRR2DP22532 72 aa3.52□□□□□ -1.85
RAPGEF3-210ENST00000482843 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
RAPGEF3-210ENST00000482843 MT1AP04731 61 aa3.45□□□□□ -1.86
RAPGEF3-210ENST00000482843 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
RAPGEF3-210ENST00000482843 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
RAPGEF3-210ENST00000482843 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
RAPGEF3-210ENST00000482843 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
RAPGEF3-210ENST00000482843 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.89
RAPGEF3-210ENST00000482843 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
RAPGEF3-210ENST00000482843 MT4P47944 62 aa3.23□□□□□ -1.89
RAPGEF3-210ENST00000482843 MT3P25713 68 aa3.19□□□□□ -1.9
RAPGEF3-210ENST00000482843 NEBP20929 6669 aa3.17□□□□□ -1.9
RAPGEF3-210ENST00000482843 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.91
RAPGEF3-210ENST00000482843 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
RAPGEF3-210ENST00000482843 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
RAPGEF3-210ENST00000482843 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
RAPGEF3-210ENST00000482843 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
RAPGEF3-210ENST00000482843 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
RAPGEF3-210ENST00000482843 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
RAPGEF3-210ENST00000482843 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
RAPGEF3-210ENST00000482843 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
RAPGEF3-210ENST00000482843 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
RAPGEF3-210ENST00000482843 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
RAPGEF3-210ENST00000482843 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
RAPGEF3-210ENST00000482843 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
RAPGEF3-210ENST00000482843 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
RAPGEF3-210ENST00000482843 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
RAPGEF3-210ENST00000482843 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
RAPGEF3-210ENST00000482843 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
RAPGEF3-210ENST00000482843 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
RAPGEF3-210ENST00000482843 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
RAPGEF3-210ENST00000482843 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
RAPGEF3-210ENST00000482843 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
RAPGEF3-210ENST00000482843 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
RAPGEF3-210ENST00000482843 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
RAPGEF3-210ENST00000482843 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
RAPGEF3-210ENST00000482843 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
RAPGEF3-210ENST00000482843 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
RAPGEF3-210ENST00000482843 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
RAPGEF3-210ENST00000482843 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 71.6 ms