RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 USH2AO75445 5202 aa3.27□□□□□ -1.89
TVP23B-203ENST00000482741 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
TVP23B-203ENST00000482741 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
TVP23B-203ENST00000482741 MT1XP80297 61 aa3.19□□□□□ -1.9
TVP23B-203ENST00000482741 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
TVP23B-203ENST00000482741 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
TVP23B-203ENST00000482741 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
TVP23B-203ENST00000482741 MUC2Q02817 5179 aa3.04□□□□□ -1.92
TVP23B-203ENST00000482741 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
TVP23B-203ENST00000482741 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
TVP23B-203ENST00000482741 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
TVP23B-203ENST00000482741 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
TVP23B-203ENST00000482741 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
TVP23B-203ENST00000482741 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
TVP23B-203ENST00000482741 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
TVP23B-203ENST00000482741 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
TVP23B-203ENST00000482741 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.94
TVP23B-203ENST00000482741 NEBP20929 6669 aa2.94□□□□□ -1.94
TVP23B-203ENST00000482741 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
TVP23B-203ENST00000482741 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
TVP23B-203ENST00000482741 MT1EP04732 61 aa2.86□□□□□ -1.95
TVP23B-203ENST00000482741 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
TVP23B-203ENST00000482741 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.95
TVP23B-203ENST00000482741 M0R2T5 61 aa2.84□□□□□ -1.96
TVP23B-203ENST00000482741 TNP1P09430 55 aa2.83□□□□□ -1.96
TVP23B-203ENST00000482741 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
TVP23B-203ENST00000482741 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
TVP23B-203ENST00000482741 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
TVP23B-203ENST00000482741 KRTAP4-7Q9BYR0 210 aa2.74□□□□□ -1.97
TVP23B-203ENST00000482741 MT1LQ93083 61 aa2.74□□□□□ -1.97
TVP23B-203ENST00000482741 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
TVP23B-203ENST00000482741 MT1GP13640 62 aa2.73□□□□□ -1.97
TVP23B-203ENST00000482741 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
TVP23B-203ENST00000482741 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
TVP23B-203ENST00000482741 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
TVP23B-203ENST00000482741 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
TVP23B-203ENST00000482741 KRTAP19-5Q3LI72 72 aa2.67□□□□□ -1.98
TVP23B-203ENST00000482741 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
TVP23B-203ENST00000482741 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
TVP23B-203ENST00000482741 MT1MQ8N339 61 aa2.66□□□□□ -1.98
TVP23B-203ENST00000482741 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
TVP23B-203ENST00000482741 KMT2DO14686 5537 aa2.62□□□□□ -1.99
TVP23B-203ENST00000482741 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
TVP23B-203ENST00000482741 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
TVP23B-203ENST00000482741 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
TVP23B-203ENST00000482741 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
TVP23B-203ENST00000482741 MT1AP04731 61 aa2.44□□□□□ -2.02
TVP23B-203ENST00000482741 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
TVP23B-203ENST00000482741 SPRR2EP22531 72 aa2.39□□□□□ -2.03
TVP23B-203ENST00000482741 SPRR2BP35325 72 aa2.39□□□□□ -2.03
TVP23B-203ENST00000482741 SPRR2AP35326 72 aa2.39□□□□□ -2.03
TVP23B-203ENST00000482741 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
TVP23B-203ENST00000482741 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
TVP23B-203ENST00000482741 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
TVP23B-203ENST00000482741 SPRR2DP22532 72 aa2.35□□□□□ -2.03
TVP23B-203ENST00000482741 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
TVP23B-203ENST00000482741 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
TVP23B-203ENST00000482741 MDN1Q9NU22 5596 aa2.28□□□□□ -2.05
TVP23B-203ENST00000482741 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
TVP23B-203ENST00000482741 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
TVP23B-203ENST00000482741 FSIP2Q5CZC0 6907 aa2.18□□□□□ -2.06
TVP23B-203ENST00000482741 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.06
TVP23B-203ENST00000482741 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.06
TVP23B-203ENST00000482741 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
TVP23B-203ENST00000482741 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
TVP23B-203ENST00000482741 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
TVP23B-203ENST00000482741 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
TVP23B-203ENST00000482741 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
TVP23B-203ENST00000482741 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
TVP23B-203ENST00000482741 DSTQ03001 7570 aaKnown RBP2.02□□□□□ -2.09
TVP23B-203ENST00000482741 PRM1P04553 51 aa1.98□□□□□ -2.09
TVP23B-203ENST00000482741 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
TVP23B-203ENST00000482741 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
TVP23B-203ENST00000482741 MT4P47944 62 aa1.72□□□□□ -2.13
TVP23B-203ENST00000482741 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
TVP23B-203ENST00000482741 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
TVP23B-203ENST00000482741 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.21
TVP23B-203ENST00000482741 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 63.5 ms