RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 MT1LQ93083 61 aa3.12□□□□□ -1.91
CALD1-220ENST00000482470 MT1EP04732 61 aa3.12□□□□□ -1.91
CALD1-220ENST00000482470 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.92
CALD1-220ENST00000482470 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
CALD1-220ENST00000482470 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
CALD1-220ENST00000482470 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
CALD1-220ENST00000482470 LOC100996750A0A140TA64 210 aa3.06□□□□□ -1.92
CALD1-220ENST00000482470 KRTAP19-6Q3LI70 58 aa3.03□□□□□ -1.92
CALD1-220ENST00000482470 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
CALD1-220ENST00000482470 KRTAP4-6Q9BYQ5 205 aa2.99□□□□□ -1.93
CALD1-220ENST00000482470 SYNE2Q8WXH0 6885 aaKnown RBP2.98□□□□□ -1.93
CALD1-220ENST00000482470 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
CALD1-220ENST00000482470 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
CALD1-220ENST00000482470 MT1MQ8N339 61 aa2.95□□□□□ -1.94
CALD1-220ENST00000482470 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
CALD1-220ENST00000482470 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
CALD1-220ENST00000482470 KRTAP9-2Q9BYQ4 174 aa2.89□□□□□ -1.95
CALD1-220ENST00000482470 SPRR2EP22531 72 aa2.87□□□□□ -1.95
CALD1-220ENST00000482470 SPRR2BP35325 72 aa2.87□□□□□ -1.95
CALD1-220ENST00000482470 SPRR2AP35326 72 aa2.87□□□□□ -1.95
CALD1-220ENST00000482470 KRTAP2-3P0C7H8 128 aa2.87□□□□□ -1.95
CALD1-220ENST00000482470 KRTAP2-4Q9BYR9 128 aa2.87□□□□□ -1.95
CALD1-220ENST00000482470 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
CALD1-220ENST00000482470 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
CALD1-220ENST00000482470 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
CALD1-220ENST00000482470 LCE5AQ5TCM9 118 aa2.75□□□□□ -1.97
CALD1-220ENST00000482470 SPRR2DP22532 72 aa2.74□□□□□ -1.97
CALD1-220ENST00000482470 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
CALD1-220ENST00000482470 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
CALD1-220ENST00000482470 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
CALD1-220ENST00000482470 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
CALD1-220ENST00000482470 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
CALD1-220ENST00000482470 LCE1AQ5T7P2 110 aa2.66□□□□□ -1.98
CALD1-220ENST00000482470 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
CALD1-220ENST00000482470 MT1AP04731 61 aa2.63□□□□□ -1.99
CALD1-220ENST00000482470 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
CALD1-220ENST00000482470 KRTAP9-4Q9BYQ2 154 aa2.61□□□□□ -1.99
CALD1-220ENST00000482470 PRM1P04553 51 aa2.61□□□□□ -1.99
CALD1-220ENST00000482470 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
CALD1-220ENST00000482470 KRTAP9-7A8MTY7 169 aa2.6□□□□□ -1.99
CALD1-220ENST00000482470 MT4P47944 62 aa2.52□□□□□ -2.01
CALD1-220ENST00000482470 MT3P25713 68 aa2.5□□□□□ -2.01
CALD1-220ENST00000482470 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CALD1-220ENST00000482470 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
CALD1-220ENST00000482470 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
CALD1-220ENST00000482470 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
CALD1-220ENST00000482470 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
CALD1-220ENST00000482470 LCE1DQ5T752 114 aa2.42□□□□□ -2.02
CALD1-220ENST00000482470 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
CALD1-220ENST00000482470 KRTAP2-2Q9BYT5 123 aa2.35□□□□□ -2.03
CALD1-220ENST00000482470 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.04
CALD1-220ENST00000482470 KRTAP4-11Q9BYQ6 195 aa2.3□□□□□ -2.04
CALD1-220ENST00000482470 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
CALD1-220ENST00000482470 KRTAP20-1Q3LI63 56 aa2.27□□□□□ -2.05
CALD1-220ENST00000482470 NEBP20929 6669 aa2.26□□□□□ -2.05
CALD1-220ENST00000482470 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
CALD1-220ENST00000482470 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
CALD1-220ENST00000482470 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
CALD1-220ENST00000482470 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
CALD1-220ENST00000482470 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
CALD1-220ENST00000482470 KRTAP5-3Q6L8H2 238 aa2.05□□□□□ -2.08
CALD1-220ENST00000482470 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
CALD1-220ENST00000482470 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
CALD1-220ENST00000482470 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
CALD1-220ENST00000482470 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
CALD1-220ENST00000482470 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
CALD1-220ENST00000482470 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
CALD1-220ENST00000482470 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
CALD1-220ENST00000482470 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
CALD1-220ENST00000482470 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
CALD1-220ENST00000482470 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
CALD1-220ENST00000482470 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.16
CALD1-220ENST00000482470 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
CALD1-220ENST00000482470 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CALD1-220ENST00000482470 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
CALD1-220ENST00000482470 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
CALD1-220ENST00000482470 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
CALD1-220ENST00000482470 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 105.3 ms