RNA–Protein interactions for RNA: ENST00000481110.6

FGFR3-208, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best) BASIC

Gene FGFR3, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-208ENST00000481110 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
FGFR3-208ENST00000481110 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
FGFR3-208ENST00000481110 SPRR2EP22531 72 aa5.52□□□□□ -1.53
FGFR3-208ENST00000481110 SPRR2BP35325 72 aa5.52□□□□□ -1.53
FGFR3-208ENST00000481110 SPRR2AP35326 72 aa5.52□□□□□ -1.53
FGFR3-208ENST00000481110 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
FGFR3-208ENST00000481110 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
FGFR3-208ENST00000481110 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
FGFR3-208ENST00000481110 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
FGFR3-208ENST00000481110 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
FGFR3-208ENST00000481110 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
FGFR3-208ENST00000481110 MT1MQ8N339 61 aa5.33□□□□□ -1.56
FGFR3-208ENST00000481110 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
FGFR3-208ENST00000481110 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
FGFR3-208ENST00000481110 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
FGFR3-208ENST00000481110 SPRR2DP22532 72 aa5.28□□□□□ -1.56
FGFR3-208ENST00000481110 SSPOA2VEC9 5147 aa5.17□□□□□ -1.58
FGFR3-208ENST00000481110 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
FGFR3-208ENST00000481110 MACF1Q9UPN3 7388 aaKnown RBP5.13□□□□□ -1.59
FGFR3-208ENST00000481110 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
FGFR3-208ENST00000481110 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
FGFR3-208ENST00000481110 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
FGFR3-208ENST00000481110 LCE3DQ9BYE3 92 aa5.07□□□□□ -1.6
FGFR3-208ENST00000481110 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
FGFR3-208ENST00000481110 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
FGFR3-208ENST00000481110 MT4P47944 62 aa4.94□□□□□ -1.62
FGFR3-208ENST00000481110 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
FGFR3-208ENST00000481110 PRM1P04553 51 aa4.86□□□□□ -1.63
FGFR3-208ENST00000481110 MT1AP04731 61 aa4.79□□□□□ -1.64
FGFR3-208ENST00000481110 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
FGFR3-208ENST00000481110 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
FGFR3-208ENST00000481110 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
FGFR3-208ENST00000481110 MT3P25713 68 aa4.73□□□□□ -1.65
FGFR3-208ENST00000481110 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
FGFR3-208ENST00000481110 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
FGFR3-208ENST00000481110 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
FGFR3-208ENST00000481110 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
FGFR3-208ENST00000481110 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
FGFR3-208ENST00000481110 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
FGFR3-208ENST00000481110 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
FGFR3-208ENST00000481110 MUC19Q7Z5P9 8384 aa4.45□□□□□ -1.7
FGFR3-208ENST00000481110 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
FGFR3-208ENST00000481110 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
FGFR3-208ENST00000481110 NEBP20929 6669 aa4.23□□□□□ -1.73
FGFR3-208ENST00000481110 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
FGFR3-208ENST00000481110 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
FGFR3-208ENST00000481110 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
FGFR3-208ENST00000481110 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
FGFR3-208ENST00000481110 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
FGFR3-208ENST00000481110 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
FGFR3-208ENST00000481110 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
FGFR3-208ENST00000481110 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
FGFR3-208ENST00000481110 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
FGFR3-208ENST00000481110 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
FGFR3-208ENST00000481110 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
FGFR3-208ENST00000481110 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
FGFR3-208ENST00000481110 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
FGFR3-208ENST00000481110 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
FGFR3-208ENST00000481110 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
FGFR3-208ENST00000481110 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
FGFR3-208ENST00000481110 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
FGFR3-208ENST00000481110 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
FGFR3-208ENST00000481110 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
FGFR3-208ENST00000481110 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
FGFR3-208ENST00000481110 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
FGFR3-208ENST00000481110 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
FGFR3-208ENST00000481110 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
FGFR3-208ENST00000481110 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
FGFR3-208ENST00000481110 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
FGFR3-208ENST00000481110 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
FGFR3-208ENST00000481110 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
FGFR3-208ENST00000481110 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
FGFR3-208ENST00000481110 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
FGFR3-208ENST00000481110 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
FGFR3-208ENST00000481110 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
FGFR3-208ENST00000481110 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
FGFR3-208ENST00000481110 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 572.1 ms