RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 KRTAP4-1Q9BYQ7 146 aa1.29□□□□□ -2.2
SCN2A-205ENST00000480032 KRTAP2-2Q9BYT5 123 aa1.29□□□□□ -2.2
SCN2A-205ENST00000480032 FAT2Q9NYQ8 4349 aa1.29□□□□□ -2.2
SCN2A-205ENST00000480032 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
SCN2A-205ENST00000480032 LYSTQ99698 3801 aa1.27□□□□□ -2.21
SCN2A-205ENST00000480032 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
SCN2A-205ENST00000480032 KRTAP9-8Q9BYQ0 159 aa1.27□□□□□ -2.21
SCN2A-205ENST00000480032 LCE5AQ5TCM9 118 aa1.26□□□□□ -2.21
SCN2A-205ENST00000480032 MT1BP07438 61 aa1.25□□□□□ -2.21
SCN2A-205ENST00000480032 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
SCN2A-205ENST00000480032 KRTAP9-3Q9BYQ3 159 aa1.25□□□□□ -2.21
SCN2A-205ENST00000480032 LCE1CQ5T751 118 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 LCE1EQ5T753 118 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 LCE1FQ5T754 118 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 LCE1AQ5T7P2 110 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 PKHD1L1Q86WI1 4243 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 PKD1P98161 4303 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 MT1MQ8N339 61 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 LCE1DQ5T752 114 aa1.24□□□□□ -2.21
SCN2A-205ENST00000480032 KRTAP4-8A0A0G2JLE6 195 aa1.23□□□□□ -2.21
SCN2A-205ENST00000480032 KRTAP4-8Q9BYQ9 185 aa1.23□□□□□ -2.21
SCN2A-205ENST00000480032 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
SCN2A-205ENST00000480032 SSPOA2VEC9 5147 aa1.22□□□□□ -2.21
SCN2A-205ENST00000480032 PRM1P04553 51 aa1.21□□□□□ -2.22
SCN2A-205ENST00000480032 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.21□□□□□ -2.22
SCN2A-205ENST00000480032 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
SCN2A-205ENST00000480032 LRP2P98164 4655 aa1.2□□□□□ -2.22
SCN2A-205ENST00000480032 KMT2AQ03164 3969 aa1.2□□□□□ -2.22
SCN2A-205ENST00000480032 LPAP08519 4548 aa1.19□□□□□ -2.22
SCN2A-205ENST00000480032 FLGP20930 4061 aaPredicted RBP1.19□□□□□ -2.22
SCN2A-205ENST00000480032 KRTAP6-3Q3LI67 103 aa1.18□□□□□ -2.22
SCN2A-205ENST00000480032 TNXBP22105 4242 aa1.18□□□□□ -2.22
SCN2A-205ENST00000480032 KRTAP9-6A8MVA2 160 aa1.18□□□□□ -2.22
SCN2A-205ENST00000480032 MUC2Q02817 5179 aa1.18□□□□□ -2.22
SCN2A-205ENST00000480032 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
SCN2A-205ENST00000480032 KRTAP4-7Q9BYR0 210 aa1.16□□□□□ -2.22
SCN2A-205ENST00000480032 KMT2DO14686 5537 aa1.15□□□□□ -2.23
SCN2A-205ENST00000480032 KRTAP5-9P26371 169 aa1.15□□□□□ -2.23
SCN2A-205ENST00000480032 FSIP2Q5CZC0 6907 aa1.14□□□□□ -2.23
SCN2A-205ENST00000480032 KRTAP4-9Q9BYQ8 210 aa1.14□□□□□ -2.23
SCN2A-205ENST00000480032 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
SCN2A-205ENST00000480032 KRTAP9-9Q9BYP9 154 aa1.12□□□□□ -2.23
SCN2A-205ENST00000480032 LOC100996750A0A140TA64 210 aa1.12□□□□□ -2.23
SCN2A-205ENST00000480032 KRTAP4-6Q9BYQ5 205 aa1.11□□□□□ -2.23
SCN2A-205ENST00000480032 NEBP20929 6669 aa1.09□□□□□ -2.24
SCN2A-205ENST00000480032 FCGBPQ9Y6R7 5405 aaPredicted RBP1.08□□□□□ -2.24
SCN2A-205ENST00000480032 GPR98Q8WXG9 6306 aa1.07□□□□□ -2.24
SCN2A-205ENST00000480032 AHNAKQ09666 5890 aaKnown RBP1.07□□□□□ -2.24
SCN2A-205ENST00000480032 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
SCN2A-205ENST00000480032 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
SCN2A-205ENST00000480032 KRTAP4-3Q9BYR4 195 aa1.06□□□□□ -2.24
SCN2A-205ENST00000480032 LCE4AQ5TA78 99 aa1.05□□□□□ -2.24
SCN2A-205ENST00000480032 MACF1Q9UPN3 7388 aaKnown RBP1.03□□□□□ -2.24
SCN2A-205ENST00000480032 HMCN1Q96RW7 5635 aa1.01□□□□□ -2.25
SCN2A-205ENST00000480032 KRTAP9-4Q9BYQ2 154 aa1□□□□□ -2.25
SCN2A-205ENST00000480032 KRTAP4-2Q9BYR5 136 aa1□□□□□ -2.25
SCN2A-205ENST00000480032 KRTAP4-12Q9BQ66 201 aa1□□□□□ -2.25
SCN2A-205ENST00000480032 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
SCN2A-205ENST00000480032 KRTAP5-4Q6L8H1 288 aa0.96□□□□□ -2.26
SCN2A-205ENST00000480032 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
SCN2A-205ENST00000480032 KRTAP5-2Q701N4 177 aa0.92□□□□□ -2.26
SCN2A-205ENST00000480032 KRTAP5-5Q701N2 237 aaPredicted RBP0.92□□□□□ -2.26
SCN2A-205ENST00000480032 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
SCN2A-205ENST00000480032 KRTAP5-3Q6L8H2 238 aa0.87□□□□□ -2.27
SCN2A-205ENST00000480032 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.87□□□□□ -2.27
SCN2A-205ENST00000480032 KRTAP4-11Q9BYQ6 195 aa0.86□□□□□ -2.27
SCN2A-205ENST00000480032 KRTAP5-8O75690 187 aa0.85□□□□□ -2.27
SCN2A-205ENST00000480032 MUC5ACP98088 5654 aa0.84□□□□□ -2.27
SCN2A-205ENST00000480032 KRTAP4-4Q9BYR3 166 aa0.83□□□□□ -2.28
SCN2A-205ENST00000480032 KRTAP5-7Q6L8G8 165 aa0.83□□□□□ -2.28
SCN2A-205ENST00000480032 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
SCN2A-205ENST00000480032 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
SCN2A-205ENST00000480032 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
SCN2A-205ENST00000480032 KRTAP5-1Q6L8H4 278 aa0.74□□□□□ -2.29
SCN2A-205ENST00000480032 KRTAP5-11Q6L8G4 156 aa0.72□□□□□ -2.29
SCN2A-205ENST00000480032 KRTAP21-2Q3LI59 83 aa0.58□□□□□ -2.32
SCN2A-205ENST00000480032 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 78.1 ms