RNA–Protein interactions for RNA: ENST00000479402.1

ACTR3B-204, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 2

Gene ACTR3B, Length 5,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-204ENST00000479402 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
ACTR3B-204ENST00000479402 LCE2AQ5TA79 106 aaPredicted RBP3.93□□□□□ -1.78
ACTR3B-204ENST00000479402 MT1EP04732 61 aa3.92□□□□□ -1.78
ACTR3B-204ENST00000479402 MUC2Q02817 5179 aa3.9□□□□□ -1.79
ACTR3B-204ENST00000479402 MT3P25713 68 aa3.81□□□□□ -1.8
ACTR3B-204ENST00000479402 MT1MQ8N339 61 aa3.8□□□□□ -1.8
ACTR3B-204ENST00000479402 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
ACTR3B-204ENST00000479402 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
ACTR3B-204ENST00000479402 KRTAP9-6A0A140TA67 174 aa3.75□□□□□ -1.81
ACTR3B-204ENST00000479402 PRM1P04553 51 aa3.74□□□□□ -1.81
ACTR3B-204ENST00000479402 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
ACTR3B-204ENST00000479402 MT1AP04731 61 aa3.61□□□□□ -1.83
ACTR3B-204ENST00000479402 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
ACTR3B-204ENST00000479402 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
ACTR3B-204ENST00000479402 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
ACTR3B-204ENST00000479402 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
ACTR3B-204ENST00000479402 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
ACTR3B-204ENST00000479402 MT4P47944 62 aa3.55□□□□□ -1.84
ACTR3B-204ENST00000479402 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
ACTR3B-204ENST00000479402 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
ACTR3B-204ENST00000479402 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
ACTR3B-204ENST00000479402 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
ACTR3B-204ENST00000479402 USH2AO75445 5202 aa3.44□□□□□ -1.86
ACTR3B-204ENST00000479402 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
ACTR3B-204ENST00000479402 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
ACTR3B-204ENST00000479402 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
ACTR3B-204ENST00000479402 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
ACTR3B-204ENST00000479402 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
ACTR3B-204ENST00000479402 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
ACTR3B-204ENST00000479402 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
ACTR3B-204ENST00000479402 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
ACTR3B-204ENST00000479402 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
ACTR3B-204ENST00000479402 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
ACTR3B-204ENST00000479402 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
ACTR3B-204ENST00000479402 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
ACTR3B-204ENST00000479402 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
ACTR3B-204ENST00000479402 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
ACTR3B-204ENST00000479402 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
ACTR3B-204ENST00000479402 KMT2DO14686 5537 aa3.19□□□□□ -1.9
ACTR3B-204ENST00000479402 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
ACTR3B-204ENST00000479402 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
ACTR3B-204ENST00000479402 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
ACTR3B-204ENST00000479402 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
ACTR3B-204ENST00000479402 NEBP20929 6669 aa3.01□□□□□ -1.93
ACTR3B-204ENST00000479402 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
ACTR3B-204ENST00000479402 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
ACTR3B-204ENST00000479402 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
ACTR3B-204ENST00000479402 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
ACTR3B-204ENST00000479402 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
ACTR3B-204ENST00000479402 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
ACTR3B-204ENST00000479402 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
ACTR3B-204ENST00000479402 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
ACTR3B-204ENST00000479402 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
ACTR3B-204ENST00000479402 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
ACTR3B-204ENST00000479402 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
ACTR3B-204ENST00000479402 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
ACTR3B-204ENST00000479402 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
ACTR3B-204ENST00000479402 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
ACTR3B-204ENST00000479402 KRTAP5-3Q6L8H2 238 aa2.31□□□□□ -2.04
ACTR3B-204ENST00000479402 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
ACTR3B-204ENST00000479402 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.05
ACTR3B-204ENST00000479402 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.05
ACTR3B-204ENST00000479402 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.05
ACTR3B-204ENST00000479402 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
ACTR3B-204ENST00000479402 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
ACTR3B-204ENST00000479402 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
ACTR3B-204ENST00000479402 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
ACTR3B-204ENST00000479402 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
ACTR3B-204ENST00000479402 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
ACTR3B-204ENST00000479402 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
ACTR3B-204ENST00000479402 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
ACTR3B-204ENST00000479402 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
ACTR3B-204ENST00000479402 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
ACTR3B-204ENST00000479402 PHGR1C9JFL3 82 aa1.71□□□□□ -2.13
ACTR3B-204ENST00000479402 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
ACTR3B-204ENST00000479402 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.14
ACTR3B-204ENST00000479402 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
ACTR3B-204ENST00000479402 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 94.4 ms