RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 CAMK2N1Q7Z7J9 78 aa1.96□□□□□ -2.1
NSMCE4A-208ENST00000477289 LINC01558Q9Y6Z2 57 aa1.96□□□□□ -2.1
NSMCE4A-208ENST00000477289 FSIP2Q5CZC0 6907 aa1.96□□□□□ -2.1
NSMCE4A-208ENST00000477289 A6NN06 94 aa1.95□□□□□ -2.1
NSMCE4A-208ENST00000477289 UQCR11O14957 56 aa1.95□□□□□ -2.1
NSMCE4A-208ENST00000477289 A0A0D9SG42 100 aa1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 K7ERS5 55 aa1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 RPS28P62857 69 aaKnown RBP1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 MT1BP07438 61 aa1.92□□□□□ -2.1
NSMCE4A-208ENST00000477289 SPATA8Q6RVD6 105 aa1.92□□□□□ -2.1
NSMCE4A-208ENST00000477289 Q1T7F1 81 aa1.91□□□□□ -2.1
NSMCE4A-208ENST00000477289 PSPHP1O15172 72 aa1.9□□□□□ -2.11
NSMCE4A-208ENST00000477289 MIR22HGQ0VDD5 57 aa1.9□□□□□ -2.11
NSMCE4A-208ENST00000477289 USH2AO75445 5202 aa1.9□□□□□ -2.11
NSMCE4A-208ENST00000477289 A6NED7 52 aa1.89□□□□□ -2.11
NSMCE4A-208ENST00000477289 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
NSMCE4A-208ENST00000477289 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
NSMCE4A-208ENST00000477289 SSPOA2VEC9 5147 aa1.87□□□□□ -2.11
NSMCE4A-208ENST00000477289 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
NSMCE4A-208ENST00000477289 MT1XP80297 61 aa1.83□□□□□ -2.12
NSMCE4A-208ENST00000477289 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
NSMCE4A-208ENST00000477289 TNP1P09430 55 aa1.81□□□□□ -2.12
NSMCE4A-208ENST00000477289 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
NSMCE4A-208ENST00000477289 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
NSMCE4A-208ENST00000477289 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
NSMCE4A-208ENST00000477289 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
NSMCE4A-208ENST00000477289 BRK1Q8WUW1 75 aa1.76□□□□□ -2.13
NSMCE4A-208ENST00000477289 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
NSMCE4A-208ENST00000477289 KRTAP25-1Q3LHN0 102 aa1.75□□□□□ -2.13
NSMCE4A-208ENST00000477289 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
NSMCE4A-208ENST00000477289 SYNE2Q8WXH0 6885 aaKnown RBP1.73□□□□□ -2.13
NSMCE4A-208ENST00000477289 ROMO1P60602 79 aa1.73□□□□□ -2.13
NSMCE4A-208ENST00000477289 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
NSMCE4A-208ENST00000477289 SPRR2EP22531 72 aa1.69□□□□□ -2.14
NSMCE4A-208ENST00000477289 SPRR2BP35325 72 aa1.69□□□□□ -2.14
NSMCE4A-208ENST00000477289 SPRR2AP35326 72 aa1.69□□□□□ -2.14
NSMCE4A-208ENST00000477289 PMAIP1Q13794 54 aa1.67□□□□□ -2.14
NSMCE4A-208ENST00000477289 PRO0628Q9UI54 55 aa1.66□□□□□ -2.14
NSMCE4A-208ENST00000477289 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
NSMCE4A-208ENST00000477289 SPRR2DP22532 72 aa1.64□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
NSMCE4A-208ENST00000477289 LUZP6Q538Z0 58 aa1.64□□□□□ -2.15
NSMCE4A-208ENST00000477289 KMT2DO14686 5537 aa1.62□□□□□ -2.15
NSMCE4A-208ENST00000477289 MT1EP04732 61 aa1.62□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
NSMCE4A-208ENST00000477289 MT1GP13640 62 aa1.61□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
NSMCE4A-208ENST00000477289 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
NSMCE4A-208ENST00000477289 NEBP20929 6669 aa1.6□□□□□ -2.15
NSMCE4A-208ENST00000477289 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
NSMCE4A-208ENST00000477289 MT1LQ93083 61 aa1.58□□□□□ -2.16
NSMCE4A-208ENST00000477289 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
NSMCE4A-208ENST00000477289 MT1MQ8N339 61 aa1.54□□□□□ -2.16
NSMCE4A-208ENST00000477289 KTN1-AS1Q86SY8 53 aa1.53□□□□□ -2.16
NSMCE4A-208ENST00000477289 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
NSMCE4A-208ENST00000477289 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
NSMCE4A-208ENST00000477289 MT4P47944 62 aa1.4□□□□□ -2.19
NSMCE4A-208ENST00000477289 MT1AP04731 61 aa1.36□□□□□ -2.19
NSMCE4A-208ENST00000477289 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
NSMCE4A-208ENST00000477289 KRTAP6-1Q3LI64 71 aa1.31□□□□□ -2.2
NSMCE4A-208ENST00000477289 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
NSMCE4A-208ENST00000477289 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
NSMCE4A-208ENST00000477289 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
NSMCE4A-208ENST00000477289 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
NSMCE4A-208ENST00000477289 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
NSMCE4A-208ENST00000477289 INE1O15225 51 aa1□□□□□ -2.25
NSMCE4A-208ENST00000477289 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
NSMCE4A-208ENST00000477289 MUC5ACP98088 5654 aa1□□□□□ -2.25
NSMCE4A-208ENST00000477289 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
NSMCE4A-208ENST00000477289 PRM1P04553 51 aa0.87□□□□□ -2.27
NSMCE4A-208ENST00000477289 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
NSMCE4A-208ENST00000477289 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
NSMCE4A-208ENST00000477289 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms