RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 MT1BP07438 61 aa2.16□□□□□ -2.06
CBWD1-212ENST00000475411 FLGP20930 4061 aaPredicted RBP2.15□□□□□ -2.07
CBWD1-212ENST00000475411 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
CBWD1-212ENST00000475411 LRP2P98164 4655 aa2.12□□□□□ -2.07
CBWD1-212ENST00000475411 MT1XP80297 61 aa2.1□□□□□ -2.07
CBWD1-212ENST00000475411 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
CBWD1-212ENST00000475411 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
CBWD1-212ENST00000475411 RNF213Q63HN8 5207 aa2.08□□□□□ -2.08
CBWD1-212ENST00000475411 MT1GP13640 62 aa2.06□□□□□ -2.08
CBWD1-212ENST00000475411 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
CBWD1-212ENST00000475411 HMCN2Q8NDA2 5059 aa2.06□□□□□ -2.08
CBWD1-212ENST00000475411 UBR4Q5T4S7 5183 aa2.04□□□□□ -2.08
CBWD1-212ENST00000475411 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
CBWD1-212ENST00000475411 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
CBWD1-212ENST00000475411 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
CBWD1-212ENST00000475411 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
CBWD1-212ENST00000475411 MUC2Q02817 5179 aa2.01□□□□□ -2.09
CBWD1-212ENST00000475411 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
CBWD1-212ENST00000475411 KRTAP19-3Q7Z4W3 81 aa1.99□□□□□ -2.09
CBWD1-212ENST00000475411 LPAP08519 4548 aa1.97□□□□□ -2.09
CBWD1-212ENST00000475411 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
CBWD1-212ENST00000475411 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
CBWD1-212ENST00000475411 LCE1AQ5T7P2 110 aa1.96□□□□□ -2.1
CBWD1-212ENST00000475411 MT3P25713 68 aa1.94□□□□□ -2.1
CBWD1-212ENST00000475411 MT1EP04732 61 aa1.93□□□□□ -2.1
CBWD1-212ENST00000475411 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
CBWD1-212ENST00000475411 MT1LQ93083 61 aa1.89□□□□□ -2.11
CBWD1-212ENST00000475411 KRTAP2-2Q9BYT5 123 aa1.89□□□□□ -2.11
CBWD1-212ENST00000475411 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
CBWD1-212ENST00000475411 MT1MQ8N339 61 aa1.87□□□□□ -2.11
CBWD1-212ENST00000475411 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.11
CBWD1-212ENST00000475411 MT4P47944 62 aa1.83□□□□□ -2.12
CBWD1-212ENST00000475411 SYNE2Q8WXH0 6885 aaKnown RBP1.82□□□□□ -2.12
CBWD1-212ENST00000475411 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
CBWD1-212ENST00000475411 KRTAP19-7Q3SYF9 63 aa1.78□□□□□ -2.12
CBWD1-212ENST00000475411 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
CBWD1-212ENST00000475411 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
CBWD1-212ENST00000475411 KRTAP5-9P26371 169 aa1.77□□□□□ -2.13
CBWD1-212ENST00000475411 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
CBWD1-212ENST00000475411 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
CBWD1-212ENST00000475411 MT1AP04731 61 aa1.73□□□□□ -2.13
CBWD1-212ENST00000475411 USH2AO75445 5202 aa1.73□□□□□ -2.13
CBWD1-212ENST00000475411 NEBP20929 6669 aa1.71□□□□□ -2.14
CBWD1-212ENST00000475411 PRM1P04553 51 aa1.7□□□□□ -2.14
CBWD1-212ENST00000475411 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
CBWD1-212ENST00000475411 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
CBWD1-212ENST00000475411 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
CBWD1-212ENST00000475411 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
CBWD1-212ENST00000475411 LCE1FQ5T754 118 aa1.62□□□□□ -2.15
CBWD1-212ENST00000475411 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
CBWD1-212ENST00000475411 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
CBWD1-212ENST00000475411 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
CBWD1-212ENST00000475411 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
CBWD1-212ENST00000475411 KMT2DO14686 5537 aa1.55□□□□□ -2.16
CBWD1-212ENST00000475411 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
CBWD1-212ENST00000475411 KRTAP6-2Q3LI66 62 aa1.54□□□□□ -2.16
CBWD1-212ENST00000475411 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
CBWD1-212ENST00000475411 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
CBWD1-212ENST00000475411 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
CBWD1-212ENST00000475411 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
CBWD1-212ENST00000475411 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
CBWD1-212ENST00000475411 LCE1EQ5T753 118 aa1.46□□□□□ -2.18
CBWD1-212ENST00000475411 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
CBWD1-212ENST00000475411 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
CBWD1-212ENST00000475411 KRTAP9-6A8MVA2 160 aa1.41□□□□□ -2.18
CBWD1-212ENST00000475411 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
CBWD1-212ENST00000475411 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
CBWD1-212ENST00000475411 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
CBWD1-212ENST00000475411 LCE1CQ5T751 118 aa1.36□□□□□ -2.19
CBWD1-212ENST00000475411 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
CBWD1-212ENST00000475411 KRTAP5-5Q701N2 237 aaPredicted RBP1.33□□□□□ -2.2
CBWD1-212ENST00000475411 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
CBWD1-212ENST00000475411 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
CBWD1-212ENST00000475411 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
CBWD1-212ENST00000475411 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
CBWD1-212ENST00000475411 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
CBWD1-212ENST00000475411 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
CBWD1-212ENST00000475411 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 53.6 ms