RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
RNF220-211ENST00000474956 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
RNF220-211ENST00000474956 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
RNF220-211ENST00000474956 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
RNF220-211ENST00000474956 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
RNF220-211ENST00000474956 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
RNF220-211ENST00000474956 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
RNF220-211ENST00000474956 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
RNF220-211ENST00000474956 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
RNF220-211ENST00000474956 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
RNF220-211ENST00000474956 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
RNF220-211ENST00000474956 MT1GP13640 62 aa4.12□□□□□ -1.75
RNF220-211ENST00000474956 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
RNF220-211ENST00000474956 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
RNF220-211ENST00000474956 MT1MQ8N339 61 aa4.09□□□□□ -1.76
RNF220-211ENST00000474956 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
RNF220-211ENST00000474956 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
RNF220-211ENST00000474956 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
RNF220-211ENST00000474956 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
RNF220-211ENST00000474956 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
RNF220-211ENST00000474956 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
RNF220-211ENST00000474956 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
RNF220-211ENST00000474956 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
RNF220-211ENST00000474956 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
RNF220-211ENST00000474956 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
RNF220-211ENST00000474956 SPRR2EP22531 72 aa3.75□□□□□ -1.81
RNF220-211ENST00000474956 SPRR2BP35325 72 aa3.75□□□□□ -1.81
RNF220-211ENST00000474956 SPRR2AP35326 72 aa3.75□□□□□ -1.81
RNF220-211ENST00000474956 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
RNF220-211ENST00000474956 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
RNF220-211ENST00000474956 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
RNF220-211ENST00000474956 MT1AP04731 61 aa3.62□□□□□ -1.83
RNF220-211ENST00000474956 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
RNF220-211ENST00000474956 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
RNF220-211ENST00000474956 SPRR2DP22532 72 aa3.58□□□□□ -1.84
RNF220-211ENST00000474956 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
RNF220-211ENST00000474956 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
RNF220-211ENST00000474956 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
RNF220-211ENST00000474956 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
RNF220-211ENST00000474956 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
RNF220-211ENST00000474956 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
RNF220-211ENST00000474956 NEBP20929 6669 aa3.43□□□□□ -1.86
RNF220-211ENST00000474956 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
RNF220-211ENST00000474956 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
RNF220-211ENST00000474956 PRM1P04553 51 aa3.39□□□□□ -1.87
RNF220-211ENST00000474956 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
RNF220-211ENST00000474956 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
RNF220-211ENST00000474956 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
RNF220-211ENST00000474956 MT4P47944 62 aa3.25□□□□□ -1.89
RNF220-211ENST00000474956 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
RNF220-211ENST00000474956 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
RNF220-211ENST00000474956 MT3P25713 68 aa3.21□□□□□ -1.9
RNF220-211ENST00000474956 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
RNF220-211ENST00000474956 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
RNF220-211ENST00000474956 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.92
RNF220-211ENST00000474956 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
RNF220-211ENST00000474956 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
RNF220-211ENST00000474956 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
RNF220-211ENST00000474956 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
RNF220-211ENST00000474956 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
RNF220-211ENST00000474956 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
RNF220-211ENST00000474956 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
RNF220-211ENST00000474956 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
RNF220-211ENST00000474956 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
RNF220-211ENST00000474956 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
RNF220-211ENST00000474956 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
RNF220-211ENST00000474956 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
RNF220-211ENST00000474956 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
RNF220-211ENST00000474956 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
RNF220-211ENST00000474956 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
RNF220-211ENST00000474956 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
RNF220-211ENST00000474956 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
RNF220-211ENST00000474956 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
RNF220-211ENST00000474956 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
RNF220-211ENST00000474956 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
RNF220-211ENST00000474956 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
RNF220-211ENST00000474956 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
RNF220-211ENST00000474956 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms