RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
SRRM1-210ENST00000474843 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SRRM1-210ENST00000474843 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
SRRM1-210ENST00000474843 PLAC4Q8WY50 150 aa2.22□□□□□ -2.05
SRRM1-210ENST00000474843 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
SRRM1-210ENST00000474843 A6NN06 94 aa2.19□□□□□ -2.06
SRRM1-210ENST00000474843 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
SRRM1-210ENST00000474843 Q1T7F1 81 aa2.18□□□□□ -2.06
SRRM1-210ENST00000474843 KRTAP19-6Q3LI70 58 aa2.18□□□□□ -2.06
SRRM1-210ENST00000474843 LINC01554Q52M75 96 aa2.18□□□□□ -2.06
SRRM1-210ENST00000474843 UQCR11O14957 56 aa2.17□□□□□ -2.06
SRRM1-210ENST00000474843 MT1BP07438 61 aa2.17□□□□□ -2.06
SRRM1-210ENST00000474843 PRO2289Q9P1D8 64 aa2.16□□□□□ -2.06
SRRM1-210ENST00000474843 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
SRRM1-210ENST00000474843 SPATA8Q6RVD6 105 aa2.14□□□□□ -2.07
SRRM1-210ENST00000474843 K7ERS5 55 aa2.13□□□□□ -2.07
SRRM1-210ENST00000474843 A0A0D9SG42 100 aa2.11□□□□□ -2.07
SRRM1-210ENST00000474843 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
SRRM1-210ENST00000474843 MIR22HGQ0VDD5 57 aa2.1□□□□□ -2.07
SRRM1-210ENST00000474843 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
SRRM1-210ENST00000474843 A6NED7 52 aa2.08□□□□□ -2.08
SRRM1-210ENST00000474843 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
SRRM1-210ENST00000474843 FSIP2Q5CZC0 6907 aa2.07□□□□□ -2.08
SRRM1-210ENST00000474843 MT1XP80297 61 aa2.07□□□□□ -2.08
SRRM1-210ENST00000474843 USH2AO75445 5202 aa2.05□□□□□ -2.08
SRRM1-210ENST00000474843 KRTAP25-1Q3LHN0 102 aa2.03□□□□□ -2.08
SRRM1-210ENST00000474843 CDC42SE1Q9NRR8 79 aa2.02□□□□□ -2.09
SRRM1-210ENST00000474843 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
SRRM1-210ENST00000474843 TNP1P09430 55 aa2□□□□□ -2.09
SRRM1-210ENST00000474843 FCGBPQ9Y6R7 5405 aaPredicted RBP1.98□□□□□ -2.09
SRRM1-210ENST00000474843 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
SRRM1-210ENST00000474843 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
SRRM1-210ENST00000474843 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
SRRM1-210ENST00000474843 ROMO1P60602 79 aa1.93□□□□□ -2.1
SRRM1-210ENST00000474843 BRK1Q8WUW1 75 aa1.93□□□□□ -2.1
SRRM1-210ENST00000474843 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
SRRM1-210ENST00000474843 MACF1Q9UPN3 7388 aaKnown RBP1.89□□□□□ -2.11
SRRM1-210ENST00000474843 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
SRRM1-210ENST00000474843 PMAIP1Q13794 54 aa1.86□□□□□ -2.11
SRRM1-210ENST00000474843 SPRR2EP22531 72 aa1.85□□□□□ -2.11
SRRM1-210ENST00000474843 SPRR2BP35325 72 aa1.85□□□□□ -2.11
SRRM1-210ENST00000474843 SPRR2AP35326 72 aa1.85□□□□□ -2.11
SRRM1-210ENST00000474843 KRTAP19-7Q3SYF9 63 aa1.85□□□□□ -2.11
SRRM1-210ENST00000474843 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
SRRM1-210ENST00000474843 SYNE2Q8WXH0 6885 aaKnown RBP1.83□□□□□ -2.12
SRRM1-210ENST00000474843 MT1EP04732 61 aa1.83□□□□□ -2.12
SRRM1-210ENST00000474843 MT1GP13640 62 aa1.82□□□□□ -2.12
SRRM1-210ENST00000474843 KRTAP19-3Q7Z4W3 81 aa1.81□□□□□ -2.12
SRRM1-210ENST00000474843 KRTAP2-3P0C7H8 128 aa1.8□□□□□ -2.12
SRRM1-210ENST00000474843 KRTAP2-4Q9BYR9 128 aa1.8□□□□□ -2.12
SRRM1-210ENST00000474843 KMT2DO14686 5537 aa1.8□□□□□ -2.12
SRRM1-210ENST00000474843 SPRR2DP22532 72 aa1.79□□□□□ -2.12
SRRM1-210ENST00000474843 MT1LQ93083 61 aa1.78□□□□□ -2.12
SRRM1-210ENST00000474843 KRTAP20-1Q3LI63 56 aa1.76□□□□□ -2.13
SRRM1-210ENST00000474843 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
SRRM1-210ENST00000474843 MT1MQ8N339 61 aa1.73□□□□□ -2.13
SRRM1-210ENST00000474843 KTN1-AS1Q86SY8 53 aa1.71□□□□□ -2.14
SRRM1-210ENST00000474843 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
SRRM1-210ENST00000474843 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
SRRM1-210ENST00000474843 NEBP20929 6669 aa1.66□□□□□ -2.14
SRRM1-210ENST00000474843 MDN1Q9NU22 5596 aa1.65□□□□□ -2.14
SRRM1-210ENST00000474843 DSTQ03001 7570 aaKnown RBP1.6□□□□□ -2.15
SRRM1-210ENST00000474843 MT4P47944 62 aa1.54□□□□□ -2.16
SRRM1-210ENST00000474843 MT1AP04731 61 aa1.53□□□□□ -2.16
SRRM1-210ENST00000474843 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
SRRM1-210ENST00000474843 KRTAP6-1Q3LI64 71 aa1.48□□□□□ -2.17
SRRM1-210ENST00000474843 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
SRRM1-210ENST00000474843 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
SRRM1-210ENST00000474843 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
SRRM1-210ENST00000474843 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
SRRM1-210ENST00000474843 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
SRRM1-210ENST00000474843 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.21
SRRM1-210ENST00000474843 INE1O15225 51 aa1.23□□□□□ -2.21
SRRM1-210ENST00000474843 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
SRRM1-210ENST00000474843 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
SRRM1-210ENST00000474843 PRM1P04553 51 aa0.96□□□□□ -2.26
SRRM1-210ENST00000474843 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
SRRM1-210ENST00000474843 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 63.7 ms