RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
RNF220-209ENST00000474064 MACF1Q9UPN3 7388 aaKnown RBP7.31□□□□□ -1.24
RNF220-209ENST00000474064 KRTAP2-3P0C7H8 128 aa7.26□□□□□ -1.25
RNF220-209ENST00000474064 KRTAP2-4Q9BYR9 128 aa7.26□□□□□ -1.25
RNF220-209ENST00000474064 KRTAP2-1Q9BYU5 128 aa7.26□□□□□ -1.25
RNF220-209ENST00000474064 KRTAP19-4Q3LI73 84 aa7.13□□□□□ -1.27
RNF220-209ENST00000474064 SPRR2FQ96RM1 72 aa7.13□□□□□ -1.27
RNF220-209ENST00000474064 SYNE2Q8WXH0 6885 aaKnown RBP7.11□□□□□ -1.27
RNF220-209ENST00000474064 CRCT1Q9UGL9 99 aa7.1□□□□□ -1.27
RNF220-209ENST00000474064 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
RNF220-209ENST00000474064 KRTAP19-3Q7Z4W3 81 aa7.08□□□□□ -1.28
RNF220-209ENST00000474064 MT1MQ8N339 61 aa7.01□□□□□ -1.29
RNF220-209ENST00000474064 MT1GP13640 62 aa7.01□□□□□ -1.29
RNF220-209ENST00000474064 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
RNF220-209ENST00000474064 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
RNF220-209ENST00000474064 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
RNF220-209ENST00000474064 MDN1Q9NU22 5596 aa6.88□□□□□ -1.31
RNF220-209ENST00000474064 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
RNF220-209ENST00000474064 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
RNF220-209ENST00000474064 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
RNF220-209ENST00000474064 SPRR2EP22531 72 aa6.63□□□□□ -1.35
RNF220-209ENST00000474064 SPRR2BP35325 72 aa6.63□□□□□ -1.35
RNF220-209ENST00000474064 SPRR2AP35326 72 aa6.63□□□□□ -1.35
RNF220-209ENST00000474064 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
RNF220-209ENST00000474064 KRTAP9-6A0A140TA67 174 aa6.52□□□□□ -1.37
RNF220-209ENST00000474064 KRTAP6-3Q3LI67 103 aa6.42□□□□□ -1.38
RNF220-209ENST00000474064 SPRR2DP22532 72 aa6.35□□□□□ -1.39
RNF220-209ENST00000474064 KRTAP6-1Q3LI64 71 aa6.28□□□□□ -1.4
RNF220-209ENST00000474064 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
RNF220-209ENST00000474064 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
RNF220-209ENST00000474064 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
RNF220-209ENST00000474064 MT1AP04731 61 aa6.2□□□□□ -1.42
RNF220-209ENST00000474064 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
RNF220-209ENST00000474064 NEBP20929 6669 aa6.08□□□□□ -1.44
RNF220-209ENST00000474064 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
RNF220-209ENST00000474064 PRM1P04553 51 aa5.95□□□□□ -1.46
RNF220-209ENST00000474064 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
RNF220-209ENST00000474064 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
RNF220-209ENST00000474064 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
RNF220-209ENST00000474064 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
RNF220-209ENST00000474064 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
RNF220-209ENST00000474064 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
RNF220-209ENST00000474064 MT4P47944 62 aa5.62□□□□□ -1.51
RNF220-209ENST00000474064 MT3P25713 68 aa5.61□□□□□ -1.51
RNF220-209ENST00000474064 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
RNF220-209ENST00000474064 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
RNF220-209ENST00000474064 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.53
RNF220-209ENST00000474064 HMCN1Q96RW7 5635 aa5.43□□□□□ -1.54
RNF220-209ENST00000474064 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
RNF220-209ENST00000474064 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
RNF220-209ENST00000474064 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
RNF220-209ENST00000474064 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
RNF220-209ENST00000474064 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
RNF220-209ENST00000474064 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
RNF220-209ENST00000474064 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
RNF220-209ENST00000474064 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
RNF220-209ENST00000474064 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
RNF220-209ENST00000474064 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
RNF220-209ENST00000474064 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
RNF220-209ENST00000474064 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.69
RNF220-209ENST00000474064 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
RNF220-209ENST00000474064 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
RNF220-209ENST00000474064 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
RNF220-209ENST00000474064 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
RNF220-209ENST00000474064 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
RNF220-209ENST00000474064 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
RNF220-209ENST00000474064 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
RNF220-209ENST00000474064 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
RNF220-209ENST00000474064 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
RNF220-209ENST00000474064 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
RNF220-209ENST00000474064 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
RNF220-209ENST00000474064 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
RNF220-209ENST00000474064 MUC19Q7Z5P9 8384 aa3.76□□□□□ -1.81
RNF220-209ENST00000474064 KRTAP21-1Q3LI58 79 aa3.75□□□□□ -1.81
RNF220-209ENST00000474064 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
RNF220-209ENST00000474064 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
RNF220-209ENST00000474064 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
RNF220-209ENST00000474064 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 99.5 ms