RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 HIST1H4AP62805 103 aaKnown RBP2.67□□□□□ -1.98
LSAMP-202ENST00000473171 DMAC1Q96GE9 116 aa2.67□□□□□ -1.98
LSAMP-202ENST00000473171 MP68P56378 58 aa2.64□□□□□ -1.99
LSAMP-202ENST00000473171 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
LSAMP-202ENST00000473171 ETDBQ3ZM63 59 aa2.6□□□□□ -1.99
LSAMP-202ENST00000473171 TRAV7A0A075B6U4 112 aa2.58□□□□□ -2
LSAMP-202ENST00000473171 SMIM6P0DI80 62 aa2.58□□□□□ -2
LSAMP-202ENST00000473171 ATP5EP2Q5VTU8 51 aa2.58□□□□□ -2
LSAMP-202ENST00000473171 KRTAP12-4P60329 112 aa2.57□□□□□ -2
LSAMP-202ENST00000473171 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
LSAMP-202ENST00000473171 SPTSSBQ8NFR3 76 aa2.56□□□□□ -2
LSAMP-202ENST00000473171 ACYP2P14621 99 aa2.53□□□□□ -2
LSAMP-202ENST00000473171 MUC5ACP98088 5654 aa2.53□□□□□ -2.01
LSAMP-202ENST00000473171 F8W1H4 67 aa2.52□□□□□ -2.01
LSAMP-202ENST00000473171 H3BPC8 53 aa2.52□□□□□ -2.01
LSAMP-202ENST00000473171 CHKB-CPT1BH3BT56 60 aa2.52□□□□□ -2.01
LSAMP-202ENST00000473171 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
LSAMP-202ENST00000473171 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
LSAMP-202ENST00000473171 COL5A1-AS1Q5SY13 56 aa2.5□□□□□ -2.01
LSAMP-202ENST00000473171 GTF2H5Q6ZYL4 71 aa2.49□□□□□ -2.01
LSAMP-202ENST00000473171 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
LSAMP-202ENST00000473171 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
LSAMP-202ENST00000473171 FAM240AA0A1B0GVK7 77 aa2.47□□□□□ -2.01
LSAMP-202ENST00000473171 SPATA8Q6RVD6 105 aa2.45□□□□□ -2.02
LSAMP-202ENST00000473171 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
LSAMP-202ENST00000473171 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
LSAMP-202ENST00000473171 SCGB1A1P11684 91 aa2.42□□□□□ -2.02
LSAMP-202ENST00000473171 KRTAP12-3P60328 96 aa2.41□□□□□ -2.02
LSAMP-202ENST00000473171 PCP4L1A6NKN8 68 aa2.39□□□□□ -2.03
LSAMP-202ENST00000473171 TNP1P09430 55 aa2.39□□□□□ -2.03
LSAMP-202ENST00000473171 SEC61GP60059 68 aa2.36□□□□□ -2.03
LSAMP-202ENST00000473171 SERP1Q9Y6X1 66 aa2.33□□□□□ -2.04
LSAMP-202ENST00000473171 A0A1B0GU33 70 aa2.32□□□□□ -2.04
LSAMP-202ENST00000473171 LOC105371267A0A1B0GV96 52 aa2.32□□□□□ -2.04
LSAMP-202ENST00000473171 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
LSAMP-202ENST00000473171 SNURFQ9Y675 71 aa2.3□□□□□ -2.04
LSAMP-202ENST00000473171 MT1AP04731 61 aa2.28□□□□□ -2.04
LSAMP-202ENST00000473171 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
LSAMP-202ENST00000473171 COA5Q86WW8 74 aa2.26□□□□□ -2.05
LSAMP-202ENST00000473171 SMIM26A0A096LP01 95 aa2.25□□□□□ -2.05
LSAMP-202ENST00000473171 SPANXA2-OT1Q8N9U9 137 aa2.25□□□□□ -2.05
LSAMP-202ENST00000473171 SMIM20Q8N5G0 67 aa2.2□□□□□ -2.06
LSAMP-202ENST00000473171 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
LSAMP-202ENST00000473171 KRTAP25-1Q3LHN0 102 aa2.18□□□□□ -2.06
LSAMP-202ENST00000473171 SERP2Q8N6R1 65 aa2.17□□□□□ -2.06
LSAMP-202ENST00000473171 A0A1B0GU69 56 aa2.14□□□□□ -2.07
LSAMP-202ENST00000473171 J3QR89 54 aa2.12□□□□□ -2.07
LSAMP-202ENST00000473171 A0A1B0GV90 55 aa2.06□□□□□ -2.08
LSAMP-202ENST00000473171 PRR15LQ9BU68 103 aa1.99□□□□□ -2.09
LSAMP-202ENST00000473171 H7BZZ5 65 aa1.96□□□□□ -2.1
LSAMP-202ENST00000473171 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
LSAMP-202ENST00000473171 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
LSAMP-202ENST00000473171 COX7CP15954 63 aa1.89□□□□□ -2.11
LSAMP-202ENST00000473171 K7ERU9 68 aa1.88□□□□□ -2.11
LSAMP-202ENST00000473171 UQCR11O14957 56 aa1.88□□□□□ -2.11
LSAMP-202ENST00000473171 PSPHP1O15172 72 aa1.86□□□□□ -2.11
LSAMP-202ENST00000473171 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
LSAMP-202ENST00000473171 K7ERS5 55 aa1.84□□□□□ -2.11
LSAMP-202ENST00000473171 MIR22HGQ0VDD5 57 aa1.83□□□□□ -2.12
LSAMP-202ENST00000473171 RPS28P62857 69 aaKnown RBP1.81□□□□□ -2.12
LSAMP-202ENST00000473171 V9GYY9 64 aa1.8□□□□□ -2.12
LSAMP-202ENST00000473171 PRO0628Q9UI54 55 aa1.78□□□□□ -2.12
LSAMP-202ENST00000473171 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
LSAMP-202ENST00000473171 ANAPC13Q9BS18 74 aa1.73□□□□□ -2.13
LSAMP-202ENST00000473171 CDC42SE1Q9NRR8 79 aa1.72□□□□□ -2.13
LSAMP-202ENST00000473171 A6NED7 52 aa1.68□□□□□ -2.14
LSAMP-202ENST00000473171 ATP5EP56381 51 aaPredicted RBP1.68□□□□□ -2.14
LSAMP-202ENST00000473171 CCDC179H3BU77 68 aa1.66□□□□□ -2.14
LSAMP-202ENST00000473171 ROMO1P60602 79 aa1.66□□□□□ -2.14
LSAMP-202ENST00000473171 Q1T7F1 81 aa1.66□□□□□ -2.14
LSAMP-202ENST00000473171 TMEM258P61165 79 aa1.52□□□□□ -2.17
LSAMP-202ENST00000473171 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
LSAMP-202ENST00000473171 KTN1-AS1Q86SY8 53 aa1.24□□□□□ -2.21
LSAMP-202ENST00000473171 PMAIP1Q13794 54 aa1.12□□□□□ -2.23
LSAMP-202ENST00000473171 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
LSAMP-202ENST00000473171 BRK1Q8WUW1 75 aa0.93□□□□□ -2.26
LSAMP-202ENST00000473171 PRM1P04553 51 aa0.85□□□□□ -2.27
LSAMP-202ENST00000473171 INE1O15225 51 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 62.1 ms