RNA–Protein interactions for RNA: ENST00000473039.5

DENND1A-206, Transcript of DENN domain containing 1A, humanhuman

TSL 1 (best)

Gene DENND1A, Length 4,800 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-206ENST00000473039 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
DENND1A-206ENST00000473039 SPRR2DP22532 72 aa3.82□□□□□ -1.8
DENND1A-206ENST00000473039 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
DENND1A-206ENST00000473039 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
DENND1A-206ENST00000473039 MT1LQ93083 61 aa3.78□□□□□ -1.8
DENND1A-206ENST00000473039 MT1EP04732 61 aa3.73□□□□□ -1.81
DENND1A-206ENST00000473039 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
DENND1A-206ENST00000473039 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
DENND1A-206ENST00000473039 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
DENND1A-206ENST00000473039 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
DENND1A-206ENST00000473039 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
DENND1A-206ENST00000473039 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
DENND1A-206ENST00000473039 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
DENND1A-206ENST00000473039 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
DENND1A-206ENST00000473039 LOC100996750A0A140TA64 210 aa3.57□□□□□ -1.84
DENND1A-206ENST00000473039 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
DENND1A-206ENST00000473039 MT1MQ8N339 61 aa3.56□□□□□ -1.84
DENND1A-206ENST00000473039 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
DENND1A-206ENST00000473039 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
DENND1A-206ENST00000473039 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
DENND1A-206ENST00000473039 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
DENND1A-206ENST00000473039 USH2AO75445 5202 aa3.46□□□□□ -1.86
DENND1A-206ENST00000473039 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
DENND1A-206ENST00000473039 PRM1P04553 51 aa3.45□□□□□ -1.86
DENND1A-206ENST00000473039 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
DENND1A-206ENST00000473039 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
DENND1A-206ENST00000473039 MT4P47944 62 aa3.39□□□□□ -1.87
DENND1A-206ENST00000473039 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
DENND1A-206ENST00000473039 KMT2DO14686 5537 aa3.35□□□□□ -1.87
DENND1A-206ENST00000473039 MT3P25713 68 aa3.34□□□□□ -1.87
DENND1A-206ENST00000473039 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
DENND1A-206ENST00000473039 MT1AP04731 61 aa3.3□□□□□ -1.88
DENND1A-206ENST00000473039 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.89
DENND1A-206ENST00000473039 DSTQ03001 7570 aaKnown RBP3.25□□□□□ -1.89
DENND1A-206ENST00000473039 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
DENND1A-206ENST00000473039 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
DENND1A-206ENST00000473039 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
DENND1A-206ENST00000473039 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
DENND1A-206ENST00000473039 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
DENND1A-206ENST00000473039 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
DENND1A-206ENST00000473039 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
DENND1A-206ENST00000473039 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
DENND1A-206ENST00000473039 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
DENND1A-206ENST00000473039 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
DENND1A-206ENST00000473039 NEBP20929 6669 aa3.05□□□□□ -1.92
DENND1A-206ENST00000473039 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
DENND1A-206ENST00000473039 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
DENND1A-206ENST00000473039 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
DENND1A-206ENST00000473039 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
DENND1A-206ENST00000473039 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
DENND1A-206ENST00000473039 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
DENND1A-206ENST00000473039 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
DENND1A-206ENST00000473039 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
DENND1A-206ENST00000473039 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
DENND1A-206ENST00000473039 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
DENND1A-206ENST00000473039 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
DENND1A-206ENST00000473039 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
DENND1A-206ENST00000473039 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
DENND1A-206ENST00000473039 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
DENND1A-206ENST00000473039 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
DENND1A-206ENST00000473039 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
DENND1A-206ENST00000473039 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
DENND1A-206ENST00000473039 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
DENND1A-206ENST00000473039 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
DENND1A-206ENST00000473039 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
DENND1A-206ENST00000473039 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
DENND1A-206ENST00000473039 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
DENND1A-206ENST00000473039 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
DENND1A-206ENST00000473039 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
DENND1A-206ENST00000473039 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
DENND1A-206ENST00000473039 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
DENND1A-206ENST00000473039 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
DENND1A-206ENST00000473039 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
DENND1A-206ENST00000473039 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
DENND1A-206ENST00000473039 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
DENND1A-206ENST00000473039 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
DENND1A-206ENST00000473039 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
DENND1A-206ENST00000473039 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms