RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 LCE2AQ5TA79 106 aaPredicted RBP3.23□□□□□ -1.89
UBE3C-205ENST00000470408 MT1LQ93083 61 aa3.19□□□□□ -1.9
UBE3C-205ENST00000470408 MT1EP04732 61 aa3.17□□□□□ -1.9
UBE3C-205ENST00000470408 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
UBE3C-205ENST00000470408 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
UBE3C-205ENST00000470408 MT1MQ8N339 61 aa3.06□□□□□ -1.92
UBE3C-205ENST00000470408 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
UBE3C-205ENST00000470408 KRTAP9-7A8MTY7 169 aa3.03□□□□□ -1.92
UBE3C-205ENST00000470408 MT3P25713 68 aa3.01□□□□□ -1.93
UBE3C-205ENST00000470408 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
UBE3C-205ENST00000470408 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
UBE3C-205ENST00000470408 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
UBE3C-205ENST00000470408 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
UBE3C-205ENST00000470408 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
UBE3C-205ENST00000470408 FSIP2Q5CZC0 6907 aa2.93□□□□□ -1.94
UBE3C-205ENST00000470408 USH2AO75445 5202 aa2.92□□□□□ -1.94
UBE3C-205ENST00000470408 MT4P47944 62 aa2.92□□□□□ -1.94
UBE3C-205ENST00000470408 MT1AP04731 61 aa2.89□□□□□ -1.95
UBE3C-205ENST00000470408 KMT2DO14686 5537 aa2.87□□□□□ -1.95
UBE3C-205ENST00000470408 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
UBE3C-205ENST00000470408 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
UBE3C-205ENST00000470408 PRM1P04553 51 aa2.84□□□□□ -1.95
UBE3C-205ENST00000470408 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
UBE3C-205ENST00000470408 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
UBE3C-205ENST00000470408 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
UBE3C-205ENST00000470408 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
UBE3C-205ENST00000470408 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
UBE3C-205ENST00000470408 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
UBE3C-205ENST00000470408 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
UBE3C-205ENST00000470408 LOC100996750A0A140TA64 210 aa2.75□□□□□ -1.97
UBE3C-205ENST00000470408 LCE5AQ5TCM9 118 aa2.75□□□□□ -1.97
UBE3C-205ENST00000470408 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
UBE3C-205ENST00000470408 SYNE2Q8WXH0 6885 aaKnown RBP2.71□□□□□ -1.98
UBE3C-205ENST00000470408 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
UBE3C-205ENST00000470408 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
UBE3C-205ENST00000470408 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
UBE3C-205ENST00000470408 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -2
UBE3C-205ENST00000470408 KRTAP5-9P26371 169 aa2.57□□□□□ -2
UBE3C-205ENST00000470408 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
UBE3C-205ENST00000470408 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
UBE3C-205ENST00000470408 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
UBE3C-205ENST00000470408 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
UBE3C-205ENST00000470408 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
UBE3C-205ENST00000470408 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
UBE3C-205ENST00000470408 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2.01
UBE3C-205ENST00000470408 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
UBE3C-205ENST00000470408 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
UBE3C-205ENST00000470408 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
UBE3C-205ENST00000470408 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
UBE3C-205ENST00000470408 MACF1Q9UPN3 7388 aaKnown RBP2.47□□□□□ -2.01
UBE3C-205ENST00000470408 NEBP20929 6669 aa2.44□□□□□ -2.02
UBE3C-205ENST00000470408 MDN1Q9NU22 5596 aa2.28□□□□□ -2.04
UBE3C-205ENST00000470408 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.05
UBE3C-205ENST00000470408 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
UBE3C-205ENST00000470408 KRTAP4-6Q9BYQ5 205 aa2.21□□□□□ -2.06
UBE3C-205ENST00000470408 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
UBE3C-205ENST00000470408 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
UBE3C-205ENST00000470408 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
UBE3C-205ENST00000470408 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
UBE3C-205ENST00000470408 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
UBE3C-205ENST00000470408 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
UBE3C-205ENST00000470408 KRTAP4-12Q9BQ66 201 aa1.82□□□□□ -2.12
UBE3C-205ENST00000470408 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
UBE3C-205ENST00000470408 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
UBE3C-205ENST00000470408 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
UBE3C-205ENST00000470408 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
UBE3C-205ENST00000470408 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
UBE3C-205ENST00000470408 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
UBE3C-205ENST00000470408 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
UBE3C-205ENST00000470408 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
UBE3C-205ENST00000470408 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
UBE3C-205ENST00000470408 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.16
UBE3C-205ENST00000470408 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
UBE3C-205ENST00000470408 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
UBE3C-205ENST00000470408 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
UBE3C-205ENST00000470408 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
UBE3C-205ENST00000470408 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
UBE3C-205ENST00000470408 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 169.2 ms